RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 C1orf53Q5VUE5 145 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 FBXO33Q7Z6M2 555 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 ZGPATQ8N5A5 531 aaKnown RBP4.7□□□□□ -1.66
NPM1-210ENST00000523339 PLPP7Q8NBV4 271 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 DNAAF4Q8WXU2 420 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 USP6NLQ92738 828 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 ATOH1Q92858 354 aaPredicted RBP4.7□□□□□ -1.66
NPM1-210ENST00000523339 CRBNQ96SW2 442 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 PRRX2Q99811 253 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 UPF3BQ9BZI7 483 aaKnown RBP4.7□□□□□ -1.66
NPM1-210ENST00000523339 SPC25Q9HBM1 224 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 RBPJLQ9UBG7 517 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 ABCF2Q9UG63 623 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 FAM50BQ9Y247 325 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 CNPY2Q9Y2B0 182 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 STARD13Q9Y3M8 1113 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 RABGAP1Q9Y3P9 1069 aa4.7□□□□□ -1.66
NPM1-210ENST00000523339 DNAH12Q6ZR08 3092 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 MGAMO43451 1857 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L15C9J2P7 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L13C9JLJ4 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L11C9JVI0 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L18D6R9N7 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L22D6RA61 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L17D6RBQ6 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L19D6RCP7 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L20D6RJB6 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 FAM229AH3BQW9 127 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 EFSO43281 561 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 PDE8BO95263 885 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 CA3P07451 260 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 ACTN1P12814 892 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 MYOGP15173 224 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 KCNA5P22460 613 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 ADORA2AP29274 412 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 PRDX5P30044 214 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 HOXA7P31268 230 aaPredicted RBP4.69□□□□□ -1.66
NPM1-210ENST00000523339 CAP2P40123 477 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 BTDP43251 543 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 FOXO4P98177 505 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 FAAP100Q0VG06 881 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L24Q0WX57 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 FIGNL1Q6PIW4 674 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 USP17L2Q6R6M4 530 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 SLC4A10Q6U841 1118 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 ERMP1Q7Z2K6 904 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 NCAPG2Q86XI2 1143 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 RPUSD2Q8IZ73 545 aaKnown RBP4.69□□□□□ -1.66
NPM1-210ENST00000523339 C8orf58Q8NAV2 365 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.69□□□□□ -1.66
NPM1-210ENST00000523339 TRPV1Q8NER1 839 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 NPLOC4Q8TAT6 608 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 ZNF592Q92610 1267 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 RUNDC1Q96C34 613 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 TOX2Q96NM4 488 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 SLC30A3Q99726 388 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 IDI2Q9BXS1 227 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 PUS3Q9BZE2 481 aaKnown RBP4.69□□□□□ -1.66
NPM1-210ENST00000523339 IRF2BPLQ9H1B7 796 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 IL23AQ9NPF7 189 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 IFT57Q9NWB7 429 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 YBX2Q9Y2T7 364 aaKnown RBP4.69□□□□□ -1.66
NPM1-210ENST00000523339 PCDHA11Q9Y5I1 949 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 MTCH2Q9Y6C9 303 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 NCOR1O75376 2440 aa4.69□□□□□ -1.66
NPM1-210ENST00000523339 CCER2I3L3R5 266 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 GRM8O00222 908 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 STRNO43815 780 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 AKR1A1P14550 325 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 ADH6P28332 368 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 CYP2C18P33260 490 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 GATA4P43694 442 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 ID4P47928 161 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 ACLYP53396 1101 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 CCL23P55773 120 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 FLIIQ13045 1269 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 GRB14Q14449 540 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 TBCELQ5QJ74 424 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 ZNF468Q5VIY5 522 aaPredicted RBP4.68□□□□□ -1.66
NPM1-210ENST00000523339 OLFML2BQ68BL8 750 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 SPTY2D1Q68D10 685 aaPredicted RBP4.68□□□□□ -1.66
NPM1-210ENST00000523339 KRT40Q6A162 431 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 ATF7IPQ6VMQ6 1270 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 HFE2Q6ZVN8 426 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 NOL8Q76FK4 1167 aaKnown RBP4.68□□□□□ -1.66
NPM1-210ENST00000523339 ANKRD33Q7Z3H0 272 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 C1orf216Q8TAB5 229 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 TANGO6Q9C0B7 1094 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 HIPK3Q9H422 1215 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 TPSG1Q9NRR2 321 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 FAM86C1Q9NVL1 165 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 MARK1Q9P0L2 795 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 HERC5Q9UII4 1024 aaKnown RBP4.68□□□□□ -1.66
NPM1-210ENST00000523339 ZHX1Q9UKY1 873 aaPredicted RBP4.68□□□□□ -1.66
NPM1-210ENST00000523339 DENND2AQ9ULE3 1009 aa4.68□□□□□ -1.66
NPM1-210ENST00000523339 A0A0U1RQG5 324 aaPredicted RBP4.67□□□□□ -1.66
NPM1-210ENST00000523339 HLA-DOAP06340 250 aa4.67□□□□□ -1.66
NPM1-210ENST00000523339 LDHCP07864 332 aa4.67□□□□□ -1.66
NPM1-210ENST00000523339 HOXC6P09630 235 aa4.67□□□□□ -1.66
NPM1-210ENST00000523339 C6orf222P0C671 652 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms