RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 AKT3Q9Y243 479 aa9.79□□□□□ -0.84
SDCBP-208ENST00000520228 KDM5AP29375 1690 aaKnown RBP9.79□□□□□ -0.84
SDCBP-208ENST00000520228 A0A1W2PQU0 124 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 ZNF205O95201 554 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 VAV1P15498 845 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 FUT4P22083 530 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 PCBP3P57721 371 aaKnown RBP9.78□□□□□ -0.84
SDCBP-208ENST00000520228 EGR3Q06889 387 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 MTERF2Q49AM1 385 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 ZDHHC15Q96MV8 337 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 DNAJC7Q99615 494 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 SLC12A9Q9BXP2 914 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 FOXP3Q9BZS1 431 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 CARS2Q9HA77 564 aaKnown RBP9.78□□□□□ -0.84
SDCBP-208ENST00000520228 TCFL5Q9UL49 500 aa9.78□□□□□ -0.84
SDCBP-208ENST00000520228 TBX1O43435 398 aa9.77□□□□□ -0.85
SDCBP-208ENST00000520228 SYPP08247 313 aa9.77□□□□□ -0.85
SDCBP-208ENST00000520228 POMZP3Q6PJE2 187 aa9.77□□□□□ -0.85
SDCBP-208ENST00000520228 JMYQ8N9B5 988 aa9.77□□□□□ -0.85
SDCBP-208ENST00000520228 MCMBPQ9BTE3 642 aa9.77□□□□□ -0.85
SDCBP-208ENST00000520228 IQGAP1P46940 1657 aa9.77□□□□□ -0.85
SDCBP-208ENST00000520228 CPS1P31327 1500 aa9.77□□□□□ -0.85
SDCBP-208ENST00000520228 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-208ENST00000520228 TMEM82A0PJX8 343 aa9.76□□□□□ -0.85
SDCBP-208ENST00000520228 NOP56O00567 594 aaKnown RBP9.76□□□□□ -0.85
SDCBP-208ENST00000520228 DIAPH1O60610 1272 aaKnown RBP9.76□□□□□ -0.85
SDCBP-208ENST00000520228 VAMP4O75379 141 aa9.76□□□□□ -0.85
SDCBP-208ENST00000520228 POU4F1Q01851 419 aa9.76□□□□□ -0.85
SDCBP-208ENST00000520228 ZP2Q05996 745 aa9.76□□□□□ -0.85
SDCBP-208ENST00000520228 RTP2Q5QGT7 225 aa9.76□□□□□ -0.85
SDCBP-208ENST00000520228 CRACR2BQ8N4Y2 399 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-208ENST00000520228 MRFAP1L1Q96HT8 127 aa9.76□□□□□ -0.85
SDCBP-208ENST00000520228 FCRL3Q96P31 734 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-208ENST00000520228 ANKRD30BQ9BXX2 1392 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 ADAMTS13Q76LX8 1427 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 IQSEC2Q5JU85 1478 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 IQCA1LA6NCM1 817 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 ADCY3O60266 1144 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 KCNH1O95259 989 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 IFRD2Q12894 506 aaPredicted RBP9.75□□□□□ -0.85
SDCBP-208ENST00000520228 CWF19L1Q69YN2 538 aaKnown RBP9.75□□□□□ -0.85
SDCBP-208ENST00000520228 GTF2IRD2BQ6EKJ0 949 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 GTF2IRD2Q86UP8 949 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 PPP1R14AQ96A00 147 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 SPATA9Q9BWV2 254 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 LRP2BPQ9P2M1 347 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 SPHKAPQ2M3C7 1700 aa9.75□□□□□ -0.85
SDCBP-208ENST00000520228 AGRPO00253 132 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 TOM1O60784 492 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 PPP2R2AP63151 447 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 CYP4F3Q08477 520 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 SSRP1Q08945 709 aaKnown RBP9.74□□□□□ -0.85
SDCBP-208ENST00000520228 SLC23A3Q6PIS1 610 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 LRRC47Q8N1G4 583 aaKnown RBP9.74□□□□□ -0.85
SDCBP-208ENST00000520228 LILRB2Q8N423 598 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 AGBL5Q8NDL9 886 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 ZFP64Q9NPA5 681 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 ARHGEF4Q9NR80 690 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 PFDN2Q9UHV9 154 aa9.74□□□□□ -0.85
SDCBP-208ENST00000520228 SPATA31E1Q6ZUB1 1445 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 LRRC7Q96NW7 1537 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 SCO2A0A1W2PP80 73 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 AURKAO14965 403 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 GRIA2P42262 883 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 NOP2P46087 812 aaKnown RBP9.73□□□□□ -0.85
SDCBP-208ENST00000520228 AMPD2Q01433 879 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 NOP9Q86U38 636 aaKnown RBP9.73□□□□□ -0.85
SDCBP-208ENST00000520228 BTN2A2Q8WVV5 523 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 NKX2-4Q9H2Z4 354 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 ADAMTS6Q9UKP5 1117 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 TMEM94Q12767 1356 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 PIK3R4Q99570 1358 aa9.73□□□□□ -0.85
SDCBP-208ENST00000520228 CD3EP07766 207 aa9.72□□□□□ -0.85
SDCBP-208ENST00000520228 IFNGR1P15260 489 aa9.72□□□□□ -0.85
SDCBP-208ENST00000520228 G6PC3Q9BUM1 346 aa9.72□□□□□ -0.85
SDCBP-208ENST00000520228 PRDM7Q9NQW5 492 aa9.72□□□□□ -0.85
SDCBP-208ENST00000520228 CYP26B1Q9NR63 512 aa9.72□□□□□ -0.85
SDCBP-208ENST00000520228 EBF1Q9UH73 591 aa9.72□□□□□ -0.85
SDCBP-208ENST00000520228 GPR55Q9Y2T6 319 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-208ENST00000520228 ADGRF5Q8IZF2 1346 aa9.72□□□□□ -0.85
SDCBP-208ENST00000520228 METP08581 1390 aa9.72□□□□□ -0.85
SDCBP-208ENST00000520228 DNAJC25-GNG10A0A024R161 153 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 SSU72P8A0A1W2PR75 194 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 FKTNO75072 461 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 SCG5P05408 212 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 HSP90AA2PQ14568 343 aaPredicted RBP9.71□□□□□ -0.86
SDCBP-208ENST00000520228 DPY19L1Q2PZI1 675 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 RALGPS1Q5JS13 557 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 RCSD1Q6JBY9 416 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 ZPBP2Q6X784 338 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 TP53INP2Q8IXH6 220 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 ZBTB38Q8NAP3 1195 aaPredicted RBP9.71□□□□□ -0.86
SDCBP-208ENST00000520228 LINC01599Q8WXQ3 324 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 COPS5Q92905 334 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 ALPK1Q96QP1 1244 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 ADAMTS10Q9H324 1103 aa9.71□□□□□ -0.86
SDCBP-208ENST00000520228 MBNL3Q9NUK0 354 aaKnown RBP9.71□□□□□ -0.86
SDCBP-208ENST00000520228 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms