RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ACAP2Q15057 778 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 TAF5Q15542 800 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 SMAD1Q15797 465 aaKnown RBP6.09□□□□□ -1.44
NIPBL-204ENST00000504430 WIPI1Q5MNZ9 446 aaPredicted RBP6.09□□□□□ -1.44
NIPBL-204ENST00000504430 NLRC3Q7RTR2 1065 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 SULF2Q8IWU5 870 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 NUP133Q8WUM0 1156 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 GCC1Q96CN9 775 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 SLC26A6Q9BXS9 759 aa6.09□□□□□ -1.44
NIPBL-204ENST00000504430 NFKBIEO00221 500 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 PQBP1O60828 265 aaKnown RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 MECOMQ03112 1051 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 PRKG2Q13237 762 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 SLC14A2Q15849 920 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 LLGL2Q6P1M3 1020 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 NRSN1Q8IZ57 195 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 ARL6IP6Q8N6S5 226 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 UHMK1Q8TAS1 419 aaKnown RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 TCRBV16S1A1N1A0A5B0 115 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 CHURC1-FNTBB4DL54 471 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 CHL1O00533 1208 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 P4HA2O15460 535 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 NCK2O43639 380 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 CDC25BP30305 580 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 PRIM2P49643 509 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 KRT72Q14CN4 511 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 RILPL1Q5EBL4 403 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 IER5Q5VY09 327 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 FAAH2Q6GMR7 532 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 FASTKD5Q7L8L6 764 aaKnown RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 ASB12Q8WXK4 309 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 DPH2Q9BQC3 489 aaPredicted RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 DISC1Q9NRI5 854 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 NFKBIL1Q9UBC1 381 aaPredicted RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 ITGB1BP2Q9UKP3 347 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 PTPN22Q9Y2R2 807 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 CSADQ9Y600 493 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 SLC22A31A6NKX4 558 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 IPO8O15397 1037 aaKnown RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 TBC1D8O95759 1140 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 IDEP14735 1019 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 AKR1B1P15121 316 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 NME1P15531 152 aaKnown RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 CYP2C19P33261 490 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 RPL6Q02878 288 aaKnown RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 NCAPHQ15003 741 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 TMCO3Q6UWJ1 677 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 SCUBE1Q8IWY4 988 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 CMTR2Q8IYT2 770 aaKnown RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 SAMD14Q8IZD0 417 aaPredicted RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 PLD6Q8N2A8 252 aaKnown RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 PLPPR2Q96GM1 343 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 RADILQ96JH8 1075 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 MAP3K14Q99558 947 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 NUDT16L1Q9BRJ7 211 aaKnown RBP6.08□□□□□ -1.44
NIPBL-204ENST00000504430 KATNAL1Q9BW62 490 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 RMI1Q9H9A7 625 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 TBC1D22BQ9NU19 505 aa6.08□□□□□ -1.44
NIPBL-204ENST00000504430 IQCA1LA6NCM1 817 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 PSMA3P25788 255 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 RECQLP46063 649 aaPredicted RBP6.07□□□□□ -1.44
NIPBL-204ENST00000504430 CCT5P48643 541 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 POU4F2Q12837 409 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 MYLK4Q86YV6 388 aaPredicted RBP6.07□□□□□ -1.44
NIPBL-204ENST00000504430 MAP4K3Q8IVH8 894 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 GRAMD1CQ8IYS0 662 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 BTN2A2Q8WVV5 523 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 TBATAQ96M53 351 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 MRPL4Q9BYD3 311 aaKnown RBP6.07□□□□□ -1.44
NIPBL-204ENST00000504430 BHMT2Q9H2M3 363 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 BRD9Q9H8M2 597 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 PDP2Q9P2J9 529 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 RRP15Q9Y3B9 282 aaKnown RBP6.07□□□□□ -1.44
NIPBL-204ENST00000504430 SLC3A2P08195 630 aaKnown RBP6.07□□□□□ -1.44
NIPBL-204ENST00000504430 RARAP10276 462 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 KIAA0753Q2KHM9 967 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 ANO4Q32M45 955 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 CC2D1BQ5T0F9 858 aaKnown RBP6.07□□□□□ -1.44
NIPBL-204ENST00000504430 FAM205BPQ63HN1 556 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 NBPF5PQ86XG9 351 aaPredicted RBP6.07□□□□□ -1.44
NIPBL-204ENST00000504430 DDX11Q96FC9 970 aa6.07□□□□□ -1.44
NIPBL-204ENST00000504430 RSRC1Q96IZ7 334 aaKnown RBP6.07□□□□□ -1.44
NIPBL-204ENST00000504430 SEC62Q99442 399 aaKnown RBP6.07□□□□□ -1.44
NIPBL-204ENST00000504430 AGRPO00253 132 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 EIF3FO00303 357 aaPredicted RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 RASA4O43374 803 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 RHOQP17081 205 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ZNF423Q2M1K9 1284 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 INTS11Q5TA45 600 aaKnown RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ITPRIPL1Q6GPH6 555 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 C16orf87Q6PH81 154 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 CYP26C1Q6V0L0 522 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 SMC1BQ8NDV3 1235 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 OR13H1Q8NG92 308 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 CHTF18Q8WVB6 975 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ZNF669Q96BR6 464 aaPredicted RBP6.06□□□□□ -1.44
NIPBL-204ENST00000504430 ZIC5Q96T25 663 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 PPP1R16BQ96T49 567 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 SLC13A1Q9BZW2 595 aa6.06□□□□□ -1.44
NIPBL-204ENST00000504430 PHAXQ9H814 394 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms