RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LRRC3Q9BY71 257 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 RXFP1Q9HBX9 757 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 PCDHB14Q9Y5E9 798 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 ADH4P08319 380 aa3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 POLR2BP30876 1174 aaKnown RBP3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 GBP2P32456 591 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 KCNA1Q09470 495 aa3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 CCDC142Q17RM4 750 aa3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 USP39Q53GS9 565 aaKnown RBP3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 Q8TCH9 128 aa3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 ATG4CQ96DT6 458 aa3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 EHMT1Q9H9B1 1298 aa3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 IVNS1ABPQ9Y6Y0 642 aa3.92□□□□□ -1.78
HMGB3P17-201ENST00000504195 TNFRSF10CO14798 259 aa3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 KRTAP10-11P60412 298 aa3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 MRPS21P82921 87 aaKnown RBP3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 PRAMEF18Q5VWM3 479 aa3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 MRGPRGQ86SM5 289 aa3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 LZTR1Q8N653 840 aa3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 SMARCC1Q92922 1105 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 ADOQ96SZ5 270 aa3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 NGRNQ9NPE2 291 aaKnown RBP3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 SF3B6Q9Y3B4 125 aaKnown RBP3.91□□□□□ -1.78
HMGB3P17-201ENST00000504195 NME1P15531 152 aaKnown RBP3.9□□□□□ -1.79
HMGB3P17-201ENST00000504195 POU4F1Q01851 419 aa3.9□□□□□ -1.79
HMGB3P17-201ENST00000504195 ANKRD39Q53RE8 183 aa3.9□□□□□ -1.79
HMGB3P17-201ENST00000504195 NOL9Q5SY16 702 aaKnown RBP3.9□□□□□ -1.79
HMGB3P17-201ENST00000504195 ZC3H18Q86VM9 953 aaKnown RBP3.9□□□□□ -1.79
HMGB3P17-201ENST00000504195 TMEM192Q8IY95 271 aa3.9□□□□□ -1.79
HMGB3P17-201ENST00000504195 SLC6A18Q96N87 628 aa3.9□□□□□ -1.79
HMGB3P17-201ENST00000504195 DUSP9Q99956 384 aaKnown RBP3.9□□□□□ -1.79
HMGB3P17-201ENST00000504195 BRMS1Q9HCU9 246 aa3.9□□□□□ -1.79
HMGB3P17-201ENST00000504195 C8BP07358 591 aa3.89□□□□□ -1.79
HMGB3P17-201ENST00000504195 PRR31Q5SQ13 230 aa3.89□□□□□ -1.79
HMGB3P17-201ENST00000504195 EEF1DP3Q658K8 133 aa3.89□□□□□ -1.79
HMGB3P17-201ENST00000504195 ETV3LQ6ZN32 361 aa3.89□□□□□ -1.79
HMGB3P17-201ENST00000504195 LDLRAD3Q86YD5 345 aa3.89□□□□□ -1.79
HMGB3P17-201ENST00000504195 CCDC144CPQ8IYA2 1237 aa3.89□□□□□ -1.79
HMGB3P17-201ENST00000504195 REXO1Q8N1G1 1221 aaKnown RBP3.89□□□□□ -1.79
HMGB3P17-201ENST00000504195 FCRL3Q96P31 734 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P17-201ENST00000504195 SUCOQ9UBS9 1254 aaKnown RBP3.89□□□□□ -1.79
HMGB3P17-201ENST00000504195 PATL2C9JE40 543 aaKnown RBP3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 H0Y8X5 98 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 CYP7B1O75881 506 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 FBLP22087 321 aaKnown RBP3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 ITGAEP38570 1179 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 FAM160A1Q05DH4 1040 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 PSMD2Q13200 908 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 INTS3Q68E01 1043 aaKnown RBP3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 KBTBD2Q8IY47 623 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 FBXO27Q8NI29 283 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 AGAP2Q99490 1192 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 TMEM168Q9H0V1 697 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 L2HGDHQ9H9P8 463 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 DMRT1Q9Y5R6 373 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 FHOD1Q9Y613 1164 aa3.88□□□□□ -1.79
HMGB3P17-201ENST00000504195 MEIS3P2A8K0S8 358 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 F6X3S4 739 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 TLR3O15455 904 aaKnown RBP3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 RAMP2O60895 175 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 GARTP22102 1010 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 DAB2P98082 770 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 EAPPQ56P03 285 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 EPHA10Q5JZY3 1008 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 ZKSCAN2Q63HK3 967 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 WWC2Q6AWC2 1192 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 RCSD1Q6JBY9 416 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 PKN3Q6P5Z2 889 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 DCP2Q8IU60 420 aaKnown RBP3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 PTPN18Q99952 460 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 KCNQ5Q9NR82 932 aa3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 SUPT16HQ9Y5B9 1047 aaKnown RBP3.87□□□□□ -1.79
HMGB3P17-201ENST00000504195 TRBV23OR9-2A0A075B6M9 112 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 A0A087WZG4 1122 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 MINDY4BA8MYZ0 360 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 SHOXO15266 292 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 B4GALT4O60513 344 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 ZNF28P17035 718 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 DGCR2P98153 550 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 CD300LDQ6UXZ3 194 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 STK32CQ86UX6 486 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 MIB1Q86YT6 1006 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 AP5M1Q9H0R1 490 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 MEGF9Q9H1U4 602 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 TIMELESSQ9UNS1 1208 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 DIS3Q9Y2L1 958 aaKnown RBP3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 RWDD3Q9Y3V2 267 aa3.86□□□□□ -1.79
HMGB3P17-201ENST00000504195 GREM1O60565 184 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 CD3EP07766 207 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 MAKP20794 623 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 BMP5P22003 454 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 ZNF165P49910 485 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 PMS1P54277 932 aaKnown RBP3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 ITGA1P56199 1179 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 ZNF445P59923 1031 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 FIBCD1Q8N539 461 aa3.85□□□□□ -1.79
HMGB3P17-201ENST00000504195 EXTL1Q92935 676 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms