RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 PNISRQ8TF01 805 aaKnown RBP5.47□□□□□ -1.53
VPS52-222ENST00000495981 IRF2BPLQ9H1B7 796 aa5.47□□□□□ -1.53
VPS52-222ENST00000495981 ANTXR1Q9H6X2 564 aa5.47□□□□□ -1.53
VPS52-222ENST00000495981 DBNDD1Q9H9R9 158 aa5.47□□□□□ -1.53
VPS52-222ENST00000495981 CACNA2D2Q9NY47 1150 aa5.47□□□□□ -1.53
VPS52-222ENST00000495981 DDX56Q9NY93 547 aaKnown RBP5.47□□□□□ -1.53
VPS52-222ENST00000495981 ECM29Q5VYK3 1845 aa5.46□□□□□ -1.53
VPS52-222ENST00000495981 OTOFQ9HC10 1997 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 A0A1W2PQH9 124 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 SOBPA7XYQ1 873 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 AXIN1O15169 862 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 ANXA1P04083 346 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 POU3F3P20264 500 aaPredicted RBP5.46□□□□□ -1.54
VPS52-222ENST00000495981 SMCPP49901 116 aaPredicted RBP5.46□□□□□ -1.54
VPS52-222ENST00000495981 IFRD2Q12894 506 aaPredicted RBP5.46□□□□□ -1.54
VPS52-222ENST00000495981 PRKG1Q13976 671 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 FXNQ16595 210 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 KRT24Q2M2I5 525 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 PARP10Q53GL7 1025 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 LLGL2Q6P1M3 1020 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 DPP8Q6V1X1 898 aaPredicted RBP5.46□□□□□ -1.54
VPS52-222ENST00000495981 RIPOR1Q6ZS17 1223 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 NLRP10Q86W26 655 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 CRIPAKQ8N1N5 446 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 C19orf47Q8N9M1 422 aaKnown RBP5.46□□□□□ -1.54
VPS52-222ENST00000495981 BSNDQ8WZ55 320 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 RPGRQ92834 1020 aaKnown RBP5.46□□□□□ -1.54
VPS52-222ENST00000495981 CLMNQ96JQ2 1002 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 FEZ1Q99689 392 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 GDF15Q99988 308 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 ARHGAP39Q9C0H5 1083 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 VPS33BQ9H267 617 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 AAASQ9NRG9 546 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 PCDHB14Q9Y5E9 798 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 MAPK8IP3Q9UPT6 1336 aa5.46□□□□□ -1.54
VPS52-222ENST00000495981 RBBP6Q7Z6E9 1792 aaKnown RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 ST8SIA5O15466 376 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 IMPDH2P12268 514 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 ARNTP27540 789 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 CTGFP29279 349 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 ZNF280AP59817 542 aaPredicted RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 FKBP1BP68106 108 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 RPL6Q02878 288 aaKnown RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 PTSQ03393 145 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 PPP2R3AQ06190 1150 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 SLC10A5Q5PT55 438 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 C6orf15Q6UXA7 325 aaPredicted RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 TRIM22Q8IYM9 498 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 NGEFQ8N5V2 710 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 THAP3Q8WTV1 239 aaPredicted RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 ZNF837Q96EG3 531 aaPredicted RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 RBM17Q96I25 401 aaKnown RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 CRBNQ96SW2 442 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 FAM126AQ9BYI3 521 aaPredicted RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 ADAM19Q9H013 955 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 DNAJB12Q9NXW2 375 aaKnown RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 POLLQ9UGP5 575 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 PFDN2Q9UHV9 154 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 TSPYL4Q9UJ04 414 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 ZMYM5Q9UJ78 669 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 NAGPAQ9UK23 515 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 SUGT1Q9Y2Z0 365 aa5.45□□□□□ -1.54
VPS52-222ENST00000495981 RRP7AQ9Y3A4 280 aaKnown RBP5.45□□□□□ -1.54
VPS52-222ENST00000495981 A0A1W2PPC1 479 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 MEIS3P2A8K0S8 358 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 GFRA2O00451 464 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 ESRRAP11474 423 aaPredicted RBP5.44□□□□□ -1.54
VPS52-222ENST00000495981 CTBSQ01459 385 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 SP3Q02447 781 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 SREBF2Q12772 1141 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 GRAPQ13588 217 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 NBPF9Q3BBW0 867 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 MTERF2Q49AM1 385 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 SLC9C1Q4G0N8 1177 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 PPP1R42Q7Z4L9 355 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 TTC6Q86TZ1 520 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 FAM178BQ8IXR5 827 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 SP8Q8IXZ3 490 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 GRAPLQ8TC17 118 aaPredicted RBP5.44□□□□□ -1.54
VPS52-222ENST00000495981 FAM122AQ96E09 287 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 ERO1AQ96HE7 468 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 UTP14AQ9BVJ6 771 aaKnown RBP5.44□□□□□ -1.54
VPS52-222ENST00000495981 SLKQ9H2G2 1235 aaPredicted RBP5.44□□□□□ -1.54
VPS52-222ENST00000495981 BABAM1Q9NWV8 329 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 CHPF2Q9P2E5 772 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 ATXN7L1Q9ULK2 861 aaPredicted RBP5.44□□□□□ -1.54
VPS52-222ENST00000495981 PPME1Q9Y570 386 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 AKAP11Q9UKA4 1901 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 SH3TC1Q8TE82 1336 aa5.44□□□□□ -1.54
VPS52-222ENST00000495981 SSC5DA1L4H1 1573 aa5.43□□□□□ -1.54
VPS52-222ENST00000495981 PPP1R12AO14974 1030 aaPredicted RBP5.43□□□□□ -1.54
VPS52-222ENST00000495981 ADCY3O60266 1144 aa5.43□□□□□ -1.54
VPS52-222ENST00000495981 ECE2O60344 883 aa5.43□□□□□ -1.54
VPS52-222ENST00000495981 DNAJA2O60884 412 aa5.43□□□□□ -1.54
VPS52-222ENST00000495981 ACRP10323 421 aa5.43□□□□□ -1.54
VPS52-222ENST00000495981 HCLS1P14317 486 aaPredicted RBP5.43□□□□□ -1.54
VPS52-222ENST00000495981 TMPOP42166 694 aaKnown RBP5.43□□□□□ -1.54
VPS52-222ENST00000495981 ZYXQ15942 572 aaKnown RBP5.43□□□□□ -1.54
VPS52-222ENST00000495981 CEP135Q66GS9 1140 aa5.43□□□□□ -1.54
VPS52-222ENST00000495981 HGSNATQ68CP4 663 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms