RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PEX11AO75192 247 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 A1BGP04217 495 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 T-ENOLP0DO92 83 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 LMOD1P29536 600 aaPredicted RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 HOXA7P31268 230 aaPredicted RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 SLC8A1P32418 973 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 HDGFP51858 240 aaKnown RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 DRG2P55039 364 aaKnown RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 HADHBP55084 474 aaKnown RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 MYBPC3Q14896 1274 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 TMEM63BQ5T3F8 832 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 CYP26C1Q6V0L0 522 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 EXOC3L1Q86VI1 746 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 LSM14AQ8ND56 463 aaKnown RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 CASKIN2Q8WXE0 1202 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 RILPL2Q969X0 211 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 RBM17Q96I25 401 aaKnown RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 TRAPPC9Q96Q05 1148 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 EPAS1Q99814 870 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 LRRC1Q9BTT6 524 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 THAP9Q9H5L6 903 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 HDAC6Q9UBN7 1215 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 DDX25Q9UHL0 483 aaKnown RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 TSPYL4Q9UJ04 414 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 CTDP1Q9Y5B0 961 aaPredicted RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 VPS37CA5D8V6 355 aaPredicted RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 IL1BP01584 269 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 FERP16591 822 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 USP8P40818 1118 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 MAP3K12Q12852 859 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 DHX37Q8IY37 1157 aaKnown RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 ACTRT1Q8TDG2 376 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 PPP1R14BQ96C90 147 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 SEC16BQ96JE7 1060 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 OCEL1Q9H607 264 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 STIM2Q9P246 746 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 ANKFY1Q9P2R3 1169 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 ODF2LQ9ULJ1 636 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 CTAGE15A4D2H0 777 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 TRIM64CA6NLI5 447 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CTAGE8P0CG41 777 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 TOP1P11387 765 aaKnown RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 KLRC3Q07444 240 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 BIRC3Q13489 604 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 ZDHHC24Q6UX98 284 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CYB5R4Q7L1T6 521 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CTAGE6Q86UF2 777 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CTAGE4Q8IX94 777 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 FAM177A1Q8N128 213 aaPredicted RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 MB21D1Q8N884 522 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 BCAS4Q8TDM0 211 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 SLCO2A1Q92959 643 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 IQCDQ96DY2 449 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 EDEM3Q9BZQ6 932 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 ZWILCHQ9H900 591 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 KBTBD4Q9NVX7 518 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 ARHGAP20Q9P2F6 1191 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 LNPEPQ9UIQ6 1025 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 ROBO3Q96MS0 1386 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 GOLGA6CA6NDK9 693 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 GRM8O00222 908 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 EBAG9O00559 213 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 OPA1O60313 960 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 TLR2O60603 784 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 GOLGA6DP0CG33 693 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 IFNAR1P17181 557 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 ATP4AP20648 1035 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 RASA1P20936 1047 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 TDO2P48775 406 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 RPL26P61254 145 aaKnown RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 ATP2C1P98194 919 aaPredicted RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 MOGSQ13724 837 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 SAFB2Q14151 953 aaKnown RBP eCLIP4.57□□□□□ -1.68
USP16-205ENST00000474835 SNCBQ16143 134 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 EARS2Q5JPH6 523 aaKnown RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 RHBDF2Q6PJF5 856 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 VPS37DQ86XT2 251 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 RNF10Q8N5U6 811 aaKnown RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 ASAP3Q8TDY4 903 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 AGAP11Q8TF27 550 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 RAPGEF5Q92565 580 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 ZNF592Q92610 1267 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CALR3Q96L12 384 aaKnown RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 ALS2CR12Q96Q35 445 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 SYT15Q9BQS2 421 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 TAF1DQ9H5J8 278 aaPredicted RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 EMILIN3Q9NT22 766 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 PANK4Q9NVE7 773 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.57□□□□□ -1.68
USP16-205ENST00000474835 GOLGA6AQ9NYA3 693 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 ZNF219Q9P2Y4 722 aaPredicted RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 ZNHIT2Q9UHR6 403 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 TTC26A0AVF1 554 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CCT8L1PA6NM43 557 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 RHOBTB3O94955 611 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CPA3P15088 417 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 VAV2P52735 878 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 PMS1P54277 932 aaKnown RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 GNGT1P63211 74 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 PLOD1Q02809 727 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms