RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 PRPF38AQ8NAV1 312 aaKnown RBP16.94■□□□□ 0.3
CPSF7-205ENST00000439958 MTMR8Q96EF0 704 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 NFIBO00712 420 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 TMC6Q7Z403 805 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 ATG4CQ96DT6 458 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 GLT8D2Q9H1C3 349 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 MRPL11Q9Y3B7 192 aaKnown RBP16.93■□□□□ 0.3
CPSF7-205ENST00000439958 ERCC3P19447 782 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 FAM160B2Q86V87 743 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 ZNF280CQ8ND82 737 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 SIPA1L1O43166 1804 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 PEX10O60683 326 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 RPN1P04843 607 aaKnown RBP16.93■□□□□ 0.3
CPSF7-205ENST00000439958 MYCLP12524 364 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-205ENST00000439958 LRMPQ12912 555 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 TMOD4Q9NZQ9 345 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 ABCB11O95342 1321 aa16.93■□□□□ 0.3
CPSF7-205ENST00000439958 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
CPSF7-205ENST00000439958 SORBS3O60504 671 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 UBASH3AP57075 661 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
CPSF7-205ENST00000439958 OTUD5Q96G74 571 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 MTRQ99707 1265 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 SAMSN1Q9NSI8 373 aaKnown RBP16.92■□□□□ 0.3
CPSF7-205ENST00000439958 TBC1D7Q9P0N9 293 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 KIAA1024Q9UPX6 916 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 CSADQ9Y600 493 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 PCNTO95613 3336 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 MKRN3Q13064 507 aaKnown RBP16.92■□□□□ 0.3
CPSF7-205ENST00000439958 ILDR2Q71H61 639 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 FER1L6Q2WGJ9 1857 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 FAM86B1E9PN63 330 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 FAM86B2P0C5J1 330 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 PTPRAP18433 802 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 EIF2AK2P19525 551 aaKnown RBP16.92■□□□□ 0.3
CPSF7-205ENST00000439958 FANCCQ00597 558 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 ARID5BQ14865 1188 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 WDR78Q5VTH9 848 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 PDXDC2PQ6P474 469 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 MLKLQ8NB16 471 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 CCDC47Q96A33 483 aaKnown RBP16.92■□□□□ 0.3
CPSF7-205ENST00000439958 WNK4Q96J92 1243 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 PYM1Q9BRP8 204 aaKnown RBP16.92■□□□□ 0.3
CPSF7-205ENST00000439958 AS3MTQ9HBK9 375 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 EXOC1Q9NV70 894 aa16.92■□□□□ 0.3
CPSF7-205ENST00000439958 GTPBP6O43824 516 aaPredicted RBP16.91■□□□□ 0.3
CPSF7-205ENST00000439958 PDE4DQ08499 809 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 DPYDQ12882 1025 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 GADL1Q6ZQY3 521 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 PURBQ96QR8 312 aaKnown RBP16.91■□□□□ 0.3
CPSF7-205ENST00000439958 ELP3Q9H9T3 547 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 ADARB2Q9NS39 739 aaKnown RBP16.91■□□□□ 0.3
CPSF7-205ENST00000439958 EMILIN3Q9NT22 766 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 PGAP2Q9UHJ9 254 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 POTEB3A0JP26 581 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 POTECB2RU33 542 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 WDR46O15213 610 aaKnown RBP16.91■□□□□ 0.3
CPSF7-205ENST00000439958 PRPHP41219 470 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 SP4Q02446 784 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 E2F4Q16254 413 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 POTEBQ6S5H4 581 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 ZBED4O75132 1171 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 BACE1P56817 501 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 AP3B2Q13367 1082 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 NAALADL2Q58DX5 795 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
CPSF7-205ENST00000439958 SYNRGQ9UMZ2 1314 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 OPLAHO14841 1288 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 CD44P16070 742 aaKnown RBP16.9■□□□□ 0.3
CPSF7-205ENST00000439958 MORC3Q14149 939 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 BTNL9Q6UXG8 535 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 HAS1Q92839 578 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 AK8Q96MA6 479 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 TCEAL9Q9UHQ7 104 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 FOSP01100 380 aaPredicted RBP16.9■□□□□ 0.3
CPSF7-205ENST00000439958 CLK2P49760 499 aaKnown RBP16.9■□□□□ 0.3
CPSF7-205ENST00000439958 PLA2G4DQ86XP0 818 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 GSDMAQ96QA5 445 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 POTEFA5A3E0 1075 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 POTEIP0CG38 1075 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 GCFC2P16383 781 aaKnown RBP16.9■□□□□ 0.3
CPSF7-205ENST00000439958 POTEGQ6S5H5 508 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 POTEEQ6S8J3 1075 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 LPAR1Q92633 364 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 SLC39A2Q9NP94 309 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 ZKSCAN5Q9Y2L8 839 aa16.9■□□□□ 0.3
CPSF7-205ENST00000439958 E9PMD0 336 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 EDIL3O43854 480 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 USP14P54578 494 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 TRAF1Q13077 416 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 KMT5BQ4FZB7 885 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 FAM177A1Q8N128 213 aaPredicted RBP16.89■□□□□ 0.29
CPSF7-205ENST00000439958 LRRC15Q8TF66 581 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 MTMR9Q96QG7 549 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 PAGR1Q9BTK6 254 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 NF2P35240 595 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 SNRNP48Q6IEG0 339 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms