RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ANKRD36BP1Q96IX9 119 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 STK24Q9Y6E0 443 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 ZNF853P0CG23 659 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 ZSCAN20P17040 1043 aaPredicted RBP15.01□□□□□ -0.01
VAPA-202ENST00000400000 ZBTB38Q8NAP3 1195 aaPredicted RBP15.01□□□□□ -0.01
VAPA-202ENST00000400000 KMT5AQ9NQR1 393 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 COL17A1Q9UMD9 1497 aaPredicted RBP15.01□□□□□ -0.01
VAPA-202ENST00000400000 ZNF18P17022 549 aa15□□□□□ -0.01
VAPA-202ENST00000400000 MRPS25P82663 173 aaKnown RBP15□□□□□ -0.01
VAPA-202ENST00000400000 PRPSAP1Q14558 356 aa15□□□□□ -0.01
VAPA-202ENST00000400000 ADALQ6DHV7 355 aa15□□□□□ -0.01
VAPA-202ENST00000400000 RUFY4Q6ZNE9 571 aa15□□□□□ -0.01
VAPA-202ENST00000400000 ARMC9Q7Z3E5 817 aa15□□□□□ -0.01
VAPA-202ENST00000400000 HSPH1Q92598 858 aa15□□□□□ -0.01
VAPA-202ENST00000400000 RAB17Q9H0T7 212 aa15□□□□□ -0.01
VAPA-202ENST00000400000 FRMD4AQ9P2Q2 1039 aaPredicted RBP15□□□□□ -0.01
VAPA-202ENST00000400000 PSDA5PKW4 1024 aaPredicted RBP15□□□□□ -0.01
VAPA-202ENST00000400000 MCF2L2Q86YR7 1114 aa15□□□□□ -0.01
VAPA-202ENST00000400000 FAM71BQ8TC56 605 aa15□□□□□ -0.01
VAPA-202ENST00000400000 ZNF277Q9NRM2 450 aaPredicted RBP15□□□□□ -0.01
VAPA-202ENST00000400000 ZBTB1Q9Y2K1 713 aa15□□□□□ -0.01
VAPA-202ENST00000400000 USH1CQ9Y6N9 552 aa15□□□□□ -0.01
VAPA-202ENST00000400000 USP17L8P0C7I0 530 aa15□□□□□ -0.01
VAPA-202ENST00000400000 TROVE2P10155 538 aaKnown RBP eCLIP15□□□□□ -0.01
VAPA-202ENST00000400000 KRT3P12035 628 aa15□□□□□ -0.01
VAPA-202ENST00000400000 MAP7Q14244 749 aa15□□□□□ -0.01
VAPA-202ENST00000400000 DNAAF3Q8N9W5 541 aa15□□□□□ -0.01
VAPA-202ENST00000400000 RASSF4Q9H2L5 321 aa15□□□□□ -0.01
VAPA-202ENST00000400000 VCXQ9H320 206 aa15□□□□□ -0.01
VAPA-202ENST00000400000 TRPC5Q9UL62 973 aaPredicted RBP15□□□□□ -0.01
VAPA-202ENST00000400000 PHBP35232 272 aa15□□□□□ -0.01
VAPA-202ENST00000400000 ANGPTL8Q6UXH0 198 aa15□□□□□ -0.01
VAPA-202ENST00000400000 EAF2Q96CJ1 260 aaPredicted RBP15□□□□□ -0.01
VAPA-202ENST00000400000 LMCD1Q9NZU5 365 aa15□□□□□ -0.01
VAPA-202ENST00000400000 POLR3AO14802 1390 aaPredicted RBP15□□□□□ -0.01
VAPA-202ENST00000400000 ZMYM6O95789 1325 aa15□□□□□ -0.01
VAPA-202ENST00000400000 EEF1GP26641 437 aaKnown RBP15□□□□□ -0.01
VAPA-202ENST00000400000 NFX1Q12986 1120 aaKnown RBP15□□□□□ -0.01
VAPA-202ENST00000400000 CNKSR1Q969H4 720 aa15□□□□□ -0.01
VAPA-202ENST00000400000 CYP4F22Q6NT55 531 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 CEP170P1Q96L14 293 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 PIGSQ96S52 555 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 RRAGDQ9NQL2 400 aaPredicted RBP14.99□□□□□ -0.01
VAPA-202ENST00000400000 FAM8A1Q9UBU6 413 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 RNF8O76064 485 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 SCRN1Q12765 414 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 IQCB1Q15051 598 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 ZKSCAN8Q15776 578 aaPredicted RBP14.99□□□□□ -0.01
VAPA-202ENST00000400000 PTPRKQ15262 1439 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 ANTXR1Q9H6X2 564 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 INTUQ9ULD6 942 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 VGLL3A8MV65 326 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 NSFP46459 744 aaKnown RBP14.99□□□□□ -0.01
VAPA-202ENST00000400000 PDE1BQ01064 536 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 RWDD4Q6NW29 188 aaKnown RBP14.99□□□□□ -0.01
VAPA-202ENST00000400000 SLC10A4Q96EP9 437 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 THOC1Q96FV9 657 aaKnown RBP14.99□□□□□ -0.01
VAPA-202ENST00000400000 CNOT6LQ96LI5 555 aaKnown RBP14.99□□□□□ -0.01
VAPA-202ENST00000400000 USP17L3A6NCW0 530 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 USP17L4A6NCW7 530 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 USP17L1Q7RTZ2 530 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 METTL23Q86XA0 190 aa14.99□□□□□ -0.01
VAPA-202ENST00000400000 GNA14O95837 355 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 SLCO1A2P46721 670 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 EXOC3L4Q17RC7 722 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.98□□□□□ -0.01
VAPA-202ENST00000400000 ZNF394Q53GI3 561 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 CFAP61Q8NHU2 1237 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 FGD4Q96M96 766 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 ZWILCHQ9H900 591 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.98□□□□□ -0.01
VAPA-202ENST00000400000 FAM196BA6NMK8 535 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 ZBBXA8MT70 800 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 DALRD3Q5D0E6 543 aaKnown RBP14.98□□□□□ -0.01
VAPA-202ENST00000400000 RAB3IPQ96QF0 476 aaPredicted RBP14.98□□□□□ -0.01
VAPA-202ENST00000400000 CALN1Q9BXU9 219 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 TMEM63CQ9P1W3 806 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 CPSF3Q9UKF6 684 aaKnown RBP14.98□□□□□ -0.01
VAPA-202ENST00000400000 COG7P83436 770 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 GUCY2DQ02846 1103 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 SMIM5Q71RC9 77 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 PDCD6IPQ8WUM4 868 aaKnown RBP14.98□□□□□ -0.01
VAPA-202ENST00000400000 DSCC1Q9BVC3 393 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 IFT122Q9HBG6 1241 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 ZFYVE9O95405 1425 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 LTKP29376 864 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 C2orf54Q08AI8 447 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 SLFNL1Q499Z3 407 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 ANLNQ9NQW6 1124 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 GFPT2O94808 682 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 NSUN2Q08J23 767 aaKnown RBP eCLIP14.98□□□□□ -0.01
VAPA-202ENST00000400000 BAG5Q9UL15 447 aa14.98□□□□□ -0.01
VAPA-202ENST00000400000 TPX2Q9ULW0 747 aaKnown RBP14.98□□□□□ -0.01
VAPA-202ENST00000400000 TYW5A2RUC4 315 aaKnown RBP14.97□□□□□ -0.01
VAPA-202ENST00000400000 GSPT1P15170 499 aaKnown RBP14.97□□□□□ -0.01
VAPA-202ENST00000400000 ATP5JP18859 108 aa14.97□□□□□ -0.01
VAPA-202ENST00000400000 CTTNQ14247 550 aaKnown RBP14.97□□□□□ -0.01
VAPA-202ENST00000400000 MIS18BP1Q6P0N0 1132 aa14.97□□□□□ -0.01
VAPA-202ENST00000400000 IL17REQ8NFR9 667 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms