RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 KYQ8NBH2 561 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 SERBP1Q8NC51 408 aaKnown RBP eCLIP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 NFATC2IPQ8NCF5 419 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 NUP43Q8NFH3 380 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 GAS2L2Q8NHY3 880 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 CTCFLQ8NI51 663 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 CAGE1Q8TC20 777 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 ASAP3Q8TDY4 903 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 FBXO41Q8TF61 875 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF384Q8TF68 577 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 THAP3Q8WTV1 239 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 SLC25A43Q8WUT9 341 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 NSMCE1Q8WV22 266 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 SLC9A6Q92581 669 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 DDX17Q92841 729 aaKnown RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 NXPE3Q969Y0 559 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 ANKRD9Q96BM1 317 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 NEIL1Q96FI4 390 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 TSPAN17Q96FV3 270 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 THOC3Q96J01 351 aaKnown RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 MAML3Q96JK9 1138 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 C16orf92Q96LL3 132 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 NBPF4Q96M43 638 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 UHRF2Q96PU4 802 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 OR14A2Q96R54 314 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 TMEM209Q96SK2 561 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 OSMRQ99650 979 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 DCTN5Q9BTE1 182 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 C11orf84Q9BUA3 381 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 DUSP26Q9BV47 211 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 MLST8Q9BVC4 326 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 C2orf49Q9BVC5 232 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 C1QTNF5Q9BXJ0 243 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 LCE3DQ9BYE3 92 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 GPR62Q9BZJ7 368 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 BHLHE41Q9C0J9 482 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 CLEC4MQ9H2X3 399 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 HIPK2Q9H2X6 1198 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 SLCO5A1Q9H2Y9 848 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 CCDC86Q9H6F5 360 aaKnown RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 KIAA1586Q9HCI6 787 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 MSL2Q9HCI7 577 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 HMX1Q9NP08 348 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 KRT82Q9NSB4 513 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 TMEM260Q9NX78 707 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 ABI2Q9NYB9 513 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 DLL3Q9NYJ7 618 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 ZIM2Q9NZV7 527 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 KLK14Q9P0G3 267 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 SEMA5BQ9P283 1151 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 DNMT3BQ9UBC3 853 aaKnown RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 TNFRSF10DQ9UBN6 386 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 DKK2Q9UBU2 259 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 CLIP2Q9UDT6 1046 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 FTSJ1Q9UET6 329 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 EBF1Q9UH73 591 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 MCM8Q9UJA3 840 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 DBR1Q9UK59 544 aaKnown RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 TLK1Q9UKI8 766 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 OAZ3Q9UMX2 235 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 TTF2Q9UNY4 1162 aaKnown RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 FZD1Q9UP38 647 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 NOD1Q9Y239 953 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 NTNG1Q9Y2I2 539 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF281Q9Y2X9 895 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 PCDHGC5Q9Y5F6 944 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 HCFC2Q9Y5Z7 792 aa-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ28-201ENST00000390509 A0A087WYN8 130 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 A0A1W2PQ45 241 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 A0A1W2PQY0 241 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM129A0AVI4 362 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 DRGXA6NNA5 263 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 CAPN14A8MX76 684 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 F8W031 263 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 M0R2N6 131 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 GTPBP1O00178 669 aaKnown RBP-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 PPEF2O14830 753 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 SEMA3EO15041 775 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 FANCGO15287 622 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 ATP9BO43861 1147 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF862O60290 1169 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 CLASP2O75122 1294 aaKnown RBP-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF205O95201 554 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 B3GALT4O96024 378 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 LDLRP01130 860 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 CYP2E1P05181 493 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 ALPLP05186 524 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 DBHP09172 617 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 KRTAP1-4P0C5Y4 121 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 USP17L8P0C7I0 530 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 T-ENOLP0DO92 83 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 EDN3P14138 238 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 RHCEP18577 417 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 LIG1P18858 919 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 CR2P20023 1033 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF10P21506 573 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 CES1P23141 567 aa-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 MSX2P35548 267 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ28-201ENST00000390509 CAP2P40123 477 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms