RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C19orf44Q9H6X5 657 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 ATP10BO94823 1461 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 A0A1B0GVL5 298 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 IMPG1Q17R60 797 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 LRCH2Q5VUJ6 765 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 SPOPLQ6IQ16 392 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 ARMC9Q7Z3E5 817 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 C2CD5Q86YS7 1000 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 ANKRD44Q8N8A2 993 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 AKR1B15C9JRZ8 316 aaPredicted RBP10.61□□□□□ -0.71
CHD3-202ENST00000358181 PPP2R3AQ06190 1150 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 RBBP7Q16576 425 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 TYW1BQ6NUM6 668 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 TEX9Q8N6V9 391 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 TRIML2Q8N7C3 387 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 USP21Q9UK80 565 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 DMP1Q13316 513 aaPredicted RBP10.61□□□□□ -0.71
CHD3-202ENST00000358181 SMAD1Q15797 465 aaKnown RBP10.61□□□□□ -0.71
CHD3-202ENST00000358181 TEKT1Q969V4 418 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 EDC3Q96F86 508 aaKnown RBP10.61□□□□□ -0.71
CHD3-202ENST00000358181 CASS4Q9NQ75 786 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 SCOCQ9UIL1 159 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 TRPC5Q9UL62 973 aaPredicted RBP10.61□□□□□ -0.71
CHD3-202ENST00000358181 RPRD2Q5VT52 1461 aaKnown RBP10.61□□□□□ -0.71
CHD3-202ENST00000358181 KRT87PA6NCN2 255 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 PAMP19021 973 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 PDE6CP51160 858 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 TBL3Q12788 808 aaKnown RBP10.6□□□□□ -0.71
CHD3-202ENST00000358181 TMED1Q13445 227 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 NANOGNBQ7Z5D8 188 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 C11orf96Q7Z7L8 435 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 CACTINQ8WUQ7 758 aaKnown RBP10.6□□□□□ -0.71
CHD3-202ENST00000358181 ANKRD36BP1Q96IX9 119 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 TEX12Q9BXU0 123 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 DNAJC8O75937 253 aaPredicted RBP10.6□□□□□ -0.71
CHD3-202ENST00000358181 FAM173BQ6P4H8 233 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 SCARA5Q6ZMJ2 495 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 ADCK2Q7Z695 626 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 ELP1O95163 1332 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 IL16Q14005 1332 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 VAMP4O75379 141 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 ADCK5Q3MIX3 580 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 BAIAP2L1Q9UHR4 511 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 INTUQ9ULD6 942 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 V9GY48 417 aaPredicted RBP10.6□□□□□ -0.71
CHD3-202ENST00000358181 PCDH11XQ9BZA7 1347 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 PCDH11YQ9BZA8 1340 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 TEX2Q8IWB9 1127 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 IQUBQ8NA54 791 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 DBNDD2Q9BQY9 259 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 EDEM3Q9BZQ6 932 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 NLRC4Q9NPP4 1024 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 SART1O43290 800 aaKnown RBP10.6□□□□□ -0.71
CHD3-202ENST00000358181 BFSP1Q12934 665 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 ANKRD20A4Q4UJ75 823 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 ANKRD20A8PQ5CZ79 823 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 ANKRD20A2Q5SQ80 823 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 ANKRD20A1Q5TYW2 823 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 PRR23AA6NEV1 266 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 KCNQ3O43525 872 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 KRT7P08729 469 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 KLHL30Q0D2K2 578 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 DRP2Q13474 957 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 NKX1-1Q15270 411 aaPredicted RBP10.6□□□□□ -0.71
CHD3-202ENST00000358181 NDUFAF2Q8N183 169 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 ZNF507Q8TCN5 953 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 P3H4Q92791 437 aa10.6□□□□□ -0.71
CHD3-202ENST00000358181 TTF2Q9UNY4 1162 aaKnown RBP10.6□□□□□ -0.71
CHD3-202ENST00000358181 NDUFAB1O14561 156 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 SKAP2O75563 359 aaPredicted RBP10.59□□□□□ -0.71
CHD3-202ENST00000358181 TOM1L1O75674 476 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 PLCD1P51178 756 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 MAP3K21Q5TCX8 1036 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 SCN4BQ8IWT1 228 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 SLC26A7Q8TE54 656 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 PHKBQ93100 1093 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 XAGE2Q96GT9 111 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 EIF2AQ9BY44 585 aaKnown RBP10.59□□□□□ -0.71
CHD3-202ENST00000358181 C1orf112Q9NSG2 853 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 ZMYM3Q14202 1370 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 INO80B-WBP1J3KQ70 363 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 NCF2P19878 526 aaPredicted RBP10.59□□□□□ -0.71
CHD3-202ENST00000358181 ODR4Q5SWX8 454 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 IFT20Q8IY31 132 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 ARFGAP2Q8N6H7 521 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 STAMQ92783 540 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 INO80BQ9C086 356 aaPredicted RBP10.59□□□□□ -0.71
CHD3-202ENST00000358181 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.59□□□□□ -0.71
CHD3-202ENST00000358181 MAST3O60307 1309 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 LRRC53A6NM62 1247 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 BUB1O43683 1085 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 DPYDQ12882 1025 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 LLGL1Q15334 1064 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 STXBP2Q15833 593 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 ZNF790Q6PG37 636 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 TTLL7Q6ZT98 887 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 KIAA0825Q8IV33 1275 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 LRRC47Q8N1G4 583 aaKnown RBP10.59□□□□□ -0.71
CHD3-202ENST00000358181 DEPDC1BQ8WUY9 529 aa10.59□□□□□ -0.71
CHD3-202ENST00000358181 DPH5Q9H2P9 285 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms