RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 FXR2P51116 673 aaKnown RBP eCLIP27.87■■■□□ 2.056e-7■■□□□ 13.2
HDGF-201ENST00000357325 AMPD2Q01433 879 aa27.87■■■□□ 2.05
HDGF-201ENST00000357325 PCMTD1Q96MG8 357 aaPredicted RBP27.87■■■□□ 2.05
HDGF-201ENST00000357325 ZC3H12CQ9C0D7 883 aaKnown RBP27.87■■■□□ 2.05
HDGF-201ENST00000357325 LACRTQ9GZZ8 138 aa27.87■■■□□ 2.05
HDGF-201ENST00000357325 DUSP10Q9Y6W6 482 aa27.87■■■□□ 2.05
HDGF-201ENST00000357325 RAD21O60216 631 aa27.86■■■□□ 2.05
HDGF-201ENST00000357325 RHOXF2BP0C7M4 288 aa27.86■■■□□ 2.05
HDGF-201ENST00000357325 SNX29Q8TEQ0 813 aa27.86■■■□□ 2.05
HDGF-201ENST00000357325 HAS1Q92839 578 aa27.86■■■□□ 2.05
HDGF-201ENST00000357325 RHOXF2Q9BQY4 288 aa27.86■■■□□ 2.05
HDGF-201ENST00000357325 BICDL2A1A5D9 508 aa27.86■■■□□ 2.05
HDGF-201ENST00000357325 PLEKP08567 350 aaPredicted RBP27.86■■■□□ 2.05
HDGF-201ENST00000357325 IDEP14735 1019 aa27.86■■■□□ 2.05
HDGF-201ENST00000357325 CCDC96Q2M329 555 aa27.86■■■□□ 2.05
HDGF-201ENST00000357325 APOBEC3HQ6NTF7 200 aaKnown RBP27.86■■■□□ 2.05
HDGF-201ENST00000357325 NOA1Q8NC60 698 aaKnown RBP27.86■■■□□ 2.05
HDGF-201ENST00000357325 LRRC37AA6NMS7 1700 aa27.86■■■□□ 2.05
HDGF-201ENST00000357325 POLR3GO15318 223 aaPredicted RBP27.85■■■□□ 2.05
HDGF-201ENST00000357325 AMPD3Q01432 767 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 CYP27A1Q02318 531 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 MEA1Q16626 185 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 CNNM4Q6P4Q7 775 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 NOC3LQ8WTT2 800 aaKnown RBP27.85■■■□□ 2.05
HDGF-201ENST00000357325 CCDC47Q96A33 483 aaKnown RBP27.85■■■□□ 2.05
HDGF-201ENST00000357325 FUT8Q9BYC5 575 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 DNAJC18Q9H819 358 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 ANKRD31Q8N7Z5 1873 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 PNMA6FA0A0J9YX94 578 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 SRGAP2O75044 1071 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 CENPPQ6IPU0 288 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 CEP112Q8N8E3 955 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 SUGCTQ9HAC7 445 aa27.85■■■□□ 2.05
HDGF-201ENST00000357325 CLK2P49760 499 aaKnown RBP27.84■■■□□ 2.05
HDGF-201ENST00000357325 NHEJ1Q9H9Q4 299 aaPredicted RBP27.84■■■□□ 2.05
HDGF-201ENST00000357325 ARFGAP3Q9NP61 516 aa27.84■■■□□ 2.05
HDGF-201ENST00000357325 RIC8AQ9NPQ8 531 aa27.84■■■□□ 2.05
HDGF-201ENST00000357325 TCP10Q12799 353 aa27.84■■■□□ 2.05
HDGF-201ENST00000357325 RAD54LQ92698 747 aa27.84■■■□□ 2.05
HDGF-201ENST00000357325 DDX12PQ92771 950 aa27.84■■■□□ 2.05
HDGF-201ENST00000357325 CDK5RAP3Q96JB5 506 aa27.84■■■□□ 2.05
HDGF-201ENST00000357325 USP17L15C9J2P7 530 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 USP17L13C9JLJ4 530 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 USP17L11C9JVI0 530 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 USP17L18D6R9N7 530 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 USP17L22D6RA61 530 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 USP17L17D6RBQ6 530 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 USP17L19D6RCP7 530 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 USP17L20D6RJB6 530 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 ATP1A1P05023 1023 aaKnown RBP27.83■■■□□ 2.05
HDGF-201ENST00000357325 USP17L24Q0WX57 530 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 LONRF2Q1L5Z9 754 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 CCDC122Q5T0U0 273 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 USP17L6PQ6QN14 398 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 UNC13DQ70J99 1090 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 ZSCAN29Q8IWY8 852 aaPredicted RBP27.83■■■□□ 2.05
HDGF-201ENST00000357325 DBNDD1Q9H9R9 158 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 MYO6Q9UM54 1294 aa27.83■■■□□ 2.05
HDGF-201ENST00000357325 KRT26Q7Z3Y9 468 aa27.82■■■□□ 2.04
HDGF-201ENST00000357325 FGFBP2Q9BYJ0 223 aa27.82■■■□□ 2.04
HDGF-201ENST00000357325 ZNF263O14978 683 aa27.82■■■□□ 2.04
HDGF-201ENST00000357325 TMEM266Q2M3C6 531 aa27.82■■■□□ 2.04
HDGF-201ENST00000357325 CCDC155Q8N6L0 562 aa27.82■■■□□ 2.04
HDGF-201ENST00000357325 DDX25Q9UHL0 483 aaKnown RBP27.82■■■□□ 2.04
HDGF-201ENST00000357325 MYH7BA7E2Y1 1941 aa27.82■■■□□ 2.04
HDGF-201ENST00000357325 hCG_1984214I3L0E3 225 aa27.81■■■□□ 2.04
HDGF-201ENST00000357325 SEMA3FQ13275 785 aa27.81■■■□□ 2.04
HDGF-201ENST00000357325 TSR1Q2NL82 804 aaKnown RBP27.81■■■□□ 2.04
HDGF-201ENST00000357325 ZNF713Q8N859 430 aaPredicted RBP27.81■■■□□ 2.04
HDGF-201ENST00000357325 UBXN6Q9BZV1 441 aa27.81■■■□□ 2.04
HDGF-201ENST00000357325 SNAP25P60880 206 aa27.81■■■□□ 2.04
HDGF-201ENST00000357325 SLC27A3Q5K4L6 730 aa27.81■■■□□ 2.04
HDGF-201ENST00000357325 FAM207AQ9NSI2 230 aaPredicted RBP27.81■■■□□ 2.04
HDGF-201ENST00000357325 MYO1AQ9UBC5 1043 aa27.81■■■□□ 2.04
HDGF-201ENST00000357325 STK17AQ9UEE5 414 aa27.81■■■□□ 2.04
HDGF-201ENST00000357325 ZBED6P86452 979 aa27.8■■■□□ 2.04
HDGF-201ENST00000357325 TAL1P17542 331 aaPredicted RBP27.8■■■□□ 2.04
HDGF-201ENST00000357325 CACNB1Q02641 598 aaPredicted RBP27.8■■■□□ 2.04
HDGF-201ENST00000357325 ORC2Q13416 577 aaPredicted RBP27.8■■■□□ 2.04
HDGF-201ENST00000357325 TMEM119Q4V9L6 283 aa27.8■■■□□ 2.04
HDGF-201ENST00000357325 KRT79Q5XKE5 535 aa27.8■■■□□ 2.04
HDGF-201ENST00000357325 ERGIC2Q96RQ1 377 aa27.8■■■□□ 2.04
HDGF-201ENST00000357325 HAUS4Q9H6D7 363 aa27.8■■■□□ 2.04
HDGF-201ENST00000357325 RNF216Q9NWF9 866 aaPredicted RBP27.8■■■□□ 2.04
HDGF-201ENST00000357325 TBC1D7Q9P0N9 293 aa27.8■■■□□ 2.04
HDGF-201ENST00000357325 TRPC5Q9UL62 973 aaPredicted RBP27.8■■■□□ 2.04
HDGF-201ENST00000357325 ZBTB5O15062 677 aa27.79■■■□□ 2.04
HDGF-201ENST00000357325 PDIA5Q14554 519 aa27.79■■■□□ 2.04
HDGF-201ENST00000357325 FAM114A1Q8IWE2 563 aa27.79■■■□□ 2.04
HDGF-201ENST00000357325 VSNL1P62760 191 aa27.79■■■□□ 2.04
HDGF-201ENST00000357325 KIAA1328Q86T90 577 aa27.79■■■□□ 2.04
HDGF-201ENST00000357325 KIAA0825Q8IV33 1275 aa27.79■■■□□ 2.04
HDGF-201ENST00000357325 MSANTD4Q8NCY6 345 aa27.79■■■□□ 2.04
HDGF-201ENST00000357325 SMCR8Q8TEV9 937 aaPredicted RBP27.79■■■□□ 2.04
HDGF-201ENST00000357325 JAKMIP2Q96AA8 810 aa27.79■■■□□ 2.04
HDGF-201ENST00000357325 PSTPIP2Q9H939 334 aa27.79■■■□□ 2.04
HDGF-201ENST00000357325 CTAGE15A4D2H0 777 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 CCDC151A5D8V7 595 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 DDTLA6NHG4 134 aaPredicted RBP27.78■■■□□ 2.04
HDGF-201ENST00000357325 CTAGE8P0CG41 777 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms