RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 COG7P83436 770 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 ARMC9Q7Z3E5 817 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 DHTKD1Q96HY7 919 aaPredicted RBP12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 AKT3Q9Y243 479 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 LUC7L3O95232 432 aaKnown RBP12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 ARMCX5Q6P1M9 558 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 SCYL1Q96KG9 808 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 TMEM206Q9H813 350 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 USP17L21D6R901 530 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 ECE1P42892 770 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 EXOC3L4Q17RC7 722 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 RNF26Q9BY78 433 aaPredicted RBP12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 BAZ2BQ9UIF8 2168 aaKnown RBP12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 MCF2LO15068 1137 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 CMA1P23946 247 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 CRKLP46109 303 aaKnown RBP12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 POLA2Q14181 598 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 FNBP4Q8N3X1 1017 aaPredicted RBP12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 FAM71BQ8TC56 605 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 THEGQ9P2T0 379 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 CAMSAP1Q5T5Y3 1602 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 FRMPD2Q68DX3 1309 aaPredicted RBP12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 KRT24Q2M2I5 525 aa12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 ZHX1Q9UKY1 873 aaPredicted RBP12.33□□□□□ -0.44
VCPIP1-201ENST00000310421 PFKFB1P16118 471 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 A2ML1A8K2U0 1454 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 TECP42680 631 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 SLFN13Q68D06 897 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 KDM6BO15054 1643 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 PRKG1Q13976 671 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 G2E3Q7L622 706 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 GPR108Q9NPR9 543 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 ZSCAN20P17040 1043 aaPredicted RBP12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 ARL13BQ3SXY8 428 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 SSH3Q8TE77 659 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 NUB1Q9Y5A7 615 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 CARMIL3Q8ND23 1372 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 ZNF189O75820 626 aaPredicted RBP12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 A1BGP04217 495 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 PSMD6Q15008 389 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 PPM1KQ8N3J5 372 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 ABL1P00519 1130 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 BFSP1Q12934 665 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 ADAM9Q13443 819 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 ARHGAP27Q6ZUM4 889 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 ORAI2Q96SN7 254 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 GLI2P10070 1586 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 KCNK3O14649 394 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 LARP4BQ92615 738 aaKnown RBP12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 KLC3Q6P597 504 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 HAUS4Q9H6D7 363 aa12.32□□□□□ -0.44
VCPIP1-201ENST00000310421 DNAJC8O75937 253 aaPredicted RBP12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 FAM47AQ5JRC9 791 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 KRBA2Q6ZNG9 492 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 ATG3Q9NT62 314 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 MYO3BQ8WXR4 1341 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 PNMA6EA0A0J9YXQ4 647 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 NXNQ6DKJ4 435 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 KIAA1841Q6NSI8 718 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 BLZF1Q9H2G9 400 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 THRAP3Q9Y2W1 955 aaKnown RBP12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 JRKLQ9Y4A0 524 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 A0A1W2PQ27 194 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 A0A1W2PQ64 194 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 A0A1W2PQD8 194 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 CHRNDQ07001 517 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 PCDHA4Q9UN74 947 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 PCDHB4Q9Y5E5 795 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 ABCB4P21439 1286 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 ACCSQ96QU6 501 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 ZNF577Q9BSK1 485 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 LOC102724428A0A0B4J2F2 783 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 SIK1P57059 783 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 TTC4O95801 387 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 KIF9Q9HAQ2 790 aa12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 MRPL47Q9HD33 250 aaKnown RBP12.31□□□□□ -0.44
VCPIP1-201ENST00000310421 CLTCQ00610 1675 aaKnown RBP12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 PSAPP07602 524 aa12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 CPA1P15085 419 aa12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 HSPA6P17066 643 aa12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 GOLGA8FQ08AF8 430 aa12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 GOLGA8DPQ0D2H9 430 aa12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 MUM1Q2TAK8 710 aa12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 HDAC11Q96DB2 347 aa12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 MMEL1Q495T6 779 aa12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 BZW1Q7L1Q6 419 aaKnown RBP12.3□□□□□ -0.44
VCPIP1-201ENST00000310421 KIAA0825Q8IV33 1275 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms