RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 EFCAB5A4FU69 1503 aa2.74□□□□□ -1.97
SYNGAP1-216ENST00000636640 ZMYM4Q5VZL5 1548 aa2.74□□□□□ -1.97
SYNGAP1-216ENST00000636640 PTPRMP28827 1452 aa2.74□□□□□ -1.97
SYNGAP1-216ENST00000636640 MYO5BQ9ULV0 1848 aa2.74□□□□□ -1.97
SYNGAP1-216ENST00000636640 SAMD9LQ8IVG5 1584 aa2.74□□□□□ -1.97
SYNGAP1-216ENST00000636640 ZFYVE16Q7Z3T8 1539 aa2.73□□□□□ -1.97
SYNGAP1-216ENST00000636640 ARHGEF12Q9NZN5 1544 aa2.73□□□□□ -1.97
SYNGAP1-216ENST00000636640 FANCAO15360 1455 aa2.73□□□□□ -1.97
SYNGAP1-216ENST00000636640 NEO1Q92859 1461 aa2.73□□□□□ -1.97
SYNGAP1-216ENST00000636640 AKNAQ7Z591 1439 aa2.73□□□□□ -1.97
SYNGAP1-216ENST00000636640 CEP152O94986 1710 aa2.73□□□□□ -1.97
SYNGAP1-216ENST00000636640 XIRP1Q702N8 1843 aaKnown RBP2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 LMTK3Q96Q04 1460 aa2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 STRCP1A6NGW2 1772 aa2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 POLR1AO95602 1720 aaPredicted RBP2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 KDM5CP41229 1560 aa2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 EEA1Q15075 1411 aa2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 HNRNPUL2Q1KMD3 747 aaKnown RBP2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 PLPPR3Q6T4P5 718 aa2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 MROH2AA6NES4 1674 aa2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 ZNF142P52746 1687 aaPredicted RBP2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 ABCC1P33527 1531 aa2.72□□□□□ -1.97
SYNGAP1-216ENST00000636640 DENND4BO75064 1496 aaPredicted RBP2.71□□□□□ -1.97
SYNGAP1-216ENST00000636640 TIAM1Q13009 1591 aa2.71□□□□□ -1.98
SYNGAP1-216ENST00000636640 INO80Q9ULG1 1556 aaPredicted RBP2.71□□□□□ -1.98
SYNGAP1-216ENST00000636640 SCAPERQ9BY12 1400 aa2.71□□□□□ -1.98
SYNGAP1-216ENST00000636640 HSPA2P54652 639 aa2.71□□□□□ -1.98
SYNGAP1-216ENST00000636640 MLECQ14165 292 aa2.71□□□□□ -1.98
SYNGAP1-216ENST00000636640 ATP1B4Q9UN42 357 aaPredicted RBP2.71□□□□□ -1.98
SYNGAP1-216ENST00000636640 ARHGAP5Q13017 1502 aa2.71□□□□□ -1.98
SYNGAP1-216ENST00000636640 CROCC2H7BZ55 1655 aa2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 PLCH2O75038 1416 aa2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 TROQ12816 1431 aaPredicted RBP2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 POGZQ7Z3K3 1410 aa2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 TRAPPC8Q9Y2L5 1435 aa2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 SYCP2Q9BX26 1530 aa2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 PLEKHD1A6NEE1 506 aa2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 UBTFP17480 764 aaKnown RBP2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 CEBPAP49715 358 aaPredicted RBP2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 MYO3AQ8NEV4 1616 aa2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 REREQ9P2R6 1566 aa2.7□□□□□ -1.98
SYNGAP1-216ENST00000636640 ARID4BQ4LE39 1312 aaPredicted RBP2.69□□□□□ -1.98
SYNGAP1-216ENST00000636640 AFAP1Q8N556 730 aa2.69□□□□□ -1.98
SYNGAP1-216ENST00000636640 ATP10AO60312 1499 aa2.69□□□□□ -1.98
SYNGAP1-216ENST00000636640 PLXNC1O60486 1568 aa2.69□□□□□ -1.98
SYNGAP1-216ENST00000636640 FMN1Q68DA7 1419 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 CASKIN1Q8WXD9 1431 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 ATP7AQ04656 1500 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 GPATCH8Q9UKJ3 1502 aaKnown RBP2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 PHLDB1Q86UU1 1377 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 FYCO1Q9BQS8 1478 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 CAMSAP1Q5T5Y3 1602 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 LTBP4Q8N2S1 1624 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 MROH1Q8NDA8 1641 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 CLIP1P30622 1438 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 C9orf84Q5VXU9 1444 aa2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 ZNF644Q9H582 1327 aaPredicted RBP2.68□□□□□ -1.98
SYNGAP1-216ENST00000636640 ZC3H13Q5T200 1668 aaKnown RBP2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 CCDC18Q5T9S5 1454 aa2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 ZNF518AQ6AHZ1 1483 aa2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 MAGI2Q86UL8 1455 aa2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 MLH3Q9UHC1 1453 aa2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 LOC105371045A0A1W2PR82 267 aa2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 HNRNPMP52272 730 aaKnown RBP eCLIP2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 EFCAB2Q5VUJ9 269 aa2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 UBR1Q8IWV7 1749 aa2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 DNMT1P26358 1616 aaKnown RBP2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 AGLP35573 1532 aa2.67□□□□□ -1.98
SYNGAP1-216ENST00000636640 NEURL4Q96JN8 1562 aa2.66□□□□□ -1.98
SYNGAP1-216ENST00000636640 ZNF777Q9ULD5 760 aaPredicted RBP2.66□□□□□ -1.98
SYNGAP1-216ENST00000636640 ALKQ9UM73 1620 aa2.66□□□□□ -1.98
SYNGAP1-216ENST00000636640 EHBP1L1Q8N3D4 1523 aa2.66□□□□□ -1.98
SYNGAP1-216ENST00000636640 CEP162Q5TB80 1403 aa2.66□□□□□ -1.98
SYNGAP1-216ENST00000636640 GCC2Q8IWJ2 1684 aa2.66□□□□□ -1.98
SYNGAP1-216ENST00000636640 CEP170BQ9Y4F5 1589 aaPredicted RBP2.66□□□□□ -1.98
SYNGAP1-216ENST00000636640 CAMSAP2Q08AD1 1489 aa2.65□□□□□ -1.98
SYNGAP1-216ENST00000636640 NCOA2Q15596 1464 aa2.65□□□□□ -1.98
SYNGAP1-216ENST00000636640 MBD5Q9P267 1494 aa2.65□□□□□ -1.98
SYNGAP1-216ENST00000636640 PIK3C2BO00750 1634 aa2.65□□□□□ -1.98
SYNGAP1-216ENST00000636640 RNF17Q9BXT8 1623 aaKnown RBP2.65□□□□□ -1.98
SYNGAP1-216ENST00000636640 FBXO41Q8TF61 875 aa2.65□□□□□ -1.99
SYNGAP1-216ENST00000636640 IQGAP1P46940 1657 aa2.65□□□□□ -1.99
SYNGAP1-216ENST00000636640 CHD2O14647 1828 aaKnown RBP2.65□□□□□ -1.99
SYNGAP1-216ENST00000636640 ARHGEF5Q12774 1597 aa2.65□□□□□ -1.99
SYNGAP1-216ENST00000636640 A2MP01023 1474 aa2.65□□□□□ -1.99
SYNGAP1-216ENST00000636640 DEPDC5O75140 1603 aa2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 PTPN23Q9H3S7 1636 aa2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 KANK4Q5T7N3 995 aaPredicted RBP2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 ILDR2Q71H61 639 aa2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 CERKQ8TCT0 537 aa2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 MYT1LQ9UL68 1186 aa2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 PTPRKQ15262 1439 aa2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 MAST1Q9Y2H9 1570 aa2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 NCKAP5LQ9HCH0 1330 aa2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 EIF2AK4Q9P2K8 1649 aaKnown RBP2.64□□□□□ -1.99
SYNGAP1-216ENST00000636640 E9PCH4 1651 aa2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 SYNMO15061 1565 aa2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 SPATA31D1Q6ZQQ2 1576 aa2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 VWDEQ8N2E2 1590 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms