RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 PPP1R15BQ5SWA1 713 aa6.24□□□□□ -1.41
SCARNA4-202ENST00000625402 LMOD2Q6P5Q4 547 aa6.24□□□□□ -1.41
SCARNA4-202ENST00000625402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCARNA4-202ENST00000625402 TMEM121BQ9BXQ6 578 aaPredicted RBP6.24□□□□□ -1.41
SCARNA4-202ENST00000625402 GPHNQ9NQX3 736 aaPredicted RBP6.24□□□□□ -1.41
SCARNA4-202ENST00000625402 COLQQ9Y215 455 aaPredicted RBP6.24□□□□□ -1.41
SCARNA4-202ENST00000625402 TESPA1A2RU30 521 aaPredicted RBP6.23□□□□□ -1.41
SCARNA4-202ENST00000625402 POTEFA5A3E0 1075 aa6.23□□□□□ -1.41
SCARNA4-202ENST00000625402 OCEL1Q9H607 264 aa6.23□□□□□ -1.41
SCARNA4-202ENST00000625402 EMILIN3Q9NT22 766 aa6.23□□□□□ -1.41
SCARNA4-202ENST00000625402 POTEIP0CG38 1075 aa6.22□□□□□ -1.41
SCARNA4-202ENST00000625402 DCBLD2Q96PD2 775 aa6.22□□□□□ -1.41
SCARNA4-202ENST00000625402 BOLA1Q9Y3E2 137 aa6.22□□□□□ -1.41
SCARNA4-202ENST00000625402 ARIH1Q9Y4X5 557 aaPredicted RBP6.22□□□□□ -1.41
SCARNA4-202ENST00000625402 KIF3CO14782 793 aa6.21□□□□□ -1.42
SCARNA4-202ENST00000625402 PLCG2P16885 1265 aa6.21□□□□□ -1.42
SCARNA4-202ENST00000625402 TMEM92Q6UXU6 159 aa6.21□□□□□ -1.42
SCARNA4-202ENST00000625402 C2orf72A6NCS6 295 aa6.2□□□□□ -1.42
SCARNA4-202ENST00000625402 FOXK1P85037 733 aa6.19□□□□□ -1.42
SCARNA4-202ENST00000625402 DPYSL4O14531 572 aa6.18□□□□□ -1.42
SCARNA4-202ENST00000625402 MLLT3P42568 568 aaPredicted RBP6.18□□□□□ -1.42
SCARNA4-202ENST00000625402 TMC2Q8TDI7 906 aa6.17□□□□□ -1.42
SCARNA4-202ENST00000625402 PLPP6Q8IY26 295 aa6.16□□□□□ -1.42
SCARNA4-202ENST00000625402 METRNQ9UJH8 293 aa6.16□□□□□ -1.42
SCARNA4-202ENST00000625402 SEC24BO95487 1268 aa6.15□□□□□ -1.42
SCARNA4-202ENST00000625402 PDIA6Q15084 440 aa6.15□□□□□ -1.42
SCARNA4-202ENST00000625402 ZC3H15Q8WU90 426 aaKnown RBP6.15□□□□□ -1.42
SCARNA4-202ENST00000625402 SLC39A7Q92504 469 aa6.15□□□□□ -1.42
SCARNA4-202ENST00000625402 C7P10643 843 aa6.13□□□□□ -1.43
SCARNA4-202ENST00000625402 L3MBTL3Q96JM7 780 aaPredicted RBP6.13□□□□□ -1.43
SCARNA4-202ENST00000625402 G3V3G9 751 aa6.12□□□□□ -1.43
SCARNA4-202ENST00000625402 RBM26Q5T8P6 1007 aaKnown RBP6.12□□□□□ -1.43
SCARNA4-202ENST00000625402 TULP1O00294 542 aaPredicted RBP6.11□□□□□ -1.43
SCARNA4-202ENST00000625402 UPF1Q92900 1129 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCARNA4-202ENST00000625402 OXER1Q8TDS5 423 aa6.1□□□□□ -1.43
SCARNA4-202ENST00000625402 GPR37O15354 613 aa6.09□□□□□ -1.43
SCARNA4-202ENST00000625402 SPDYE16A6NNV3 312 aaPredicted RBP6.08□□□□□ -1.44
SCARNA4-202ENST00000625402 ZMYND10O75800 440 aa6.08□□□□□ -1.44
SCARNA4-202ENST00000625402 C3orf67Q6ZVT6 689 aa6.08□□□□□ -1.44
SCARNA4-202ENST00000625402 SLC24A3Q9HC58 644 aa6.08□□□□□ -1.44
SCARNA4-202ENST00000625402 PRIM1P49642 420 aaKnown RBP6.07□□□□□ -1.44
SCARNA4-202ENST00000625402 GPIHBP1Q8IV16 184 aa6.07□□□□□ -1.44
SCARNA4-202ENST00000625402 POTEJP0CG39 1038 aa6.06□□□□□ -1.44
SCARNA4-202ENST00000625402 BRPF1P55201 1214 aaPredicted RBP6.06□□□□□ -1.44
SCARNA4-202ENST00000625402 SMYD5Q6GMV2 418 aa6.06□□□□□ -1.44
SCARNA4-202ENST00000625402 MAP3K9P80192 1104 aa6.05□□□□□ -1.44
SCARNA4-202ENST00000625402 GRXCR2A6NFK2 248 aa6.04□□□□□ -1.44
SCARNA4-202ENST00000625402 POTEB2H3BUK9 544 aa6.04□□□□□ -1.44
SCARNA4-202ENST00000625402 BARGINQ6ZT62 677 aa6.04□□□□□ -1.44
SCARNA4-202ENST00000625402 OSBPP22059 807 aa6.03□□□□□ -1.44
SCARNA4-202ENST00000625402 PTCD2Q8WV60 388 aaKnown RBP6.03□□□□□ -1.44
SCARNA4-202ENST00000625402 DDX12PQ92771 950 aa6.03□□□□□ -1.44
SCARNA4-202ENST00000625402 EVI5O60447 810 aa6.02□□□□□ -1.45
SCARNA4-202ENST00000625402 PTGER2P43116 358 aa6.02□□□□□ -1.45
SCARNA4-202ENST00000625402 SLC34A2O95436 690 aa6.01□□□□□ -1.45
SCARNA4-202ENST00000625402 EIF2AK3Q9NZJ5 1116 aaKnown RBP6□□□□□ -1.45
SCARNA4-202ENST00000625402 KDM4FA0A1W2PPD8 638 aa5.99□□□□□ -1.45
SCARNA4-202ENST00000625402 FECHP22830 423 aa5.98□□□□□ -1.45
SCARNA4-202ENST00000625402 NEUROD2Q15784 382 aa5.98□□□□□ -1.45
SCARNA4-202ENST00000625402 CDHR5Q9HBB8 845 aa5.98□□□□□ -1.45
SCARNA4-202ENST00000625402 PCDHGA4Q9Y5G9 962 aa5.98□□□□□ -1.45
SCARNA4-202ENST00000625402 NUTM2FA1L443 756 aa5.97□□□□□ -1.45
SCARNA4-202ENST00000625402 TBC1D12O60347 775 aa5.97□□□□□ -1.45
SCARNA4-202ENST00000625402 HOXB3P14651 431 aaPredicted RBP5.97□□□□□ -1.45
SCARNA4-202ENST00000625402 GPBP1L1Q9HC44 474 aaPredicted RBP5.97□□□□□ -1.45
SCARNA4-202ENST00000625402 ANO8Q9HCE9 1232 aaPredicted RBP5.97□□□□□ -1.45
SCARNA4-202ENST00000625402 TRIM66O15016 1216 aa5.95□□□□□ -1.46
SCARNA4-202ENST00000625402 PTGDRQ13258 359 aa5.95□□□□□ -1.46
SCARNA4-202ENST00000625402 TMEM132AQ24JP5 1023 aa5.95□□□□□ -1.46
SCARNA4-202ENST00000625402 KHSRPQ92945 711 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCARNA4-202ENST00000625402 CCDC102AQ96A19 550 aa5.95□□□□□ -1.46
SCARNA4-202ENST00000625402 AK7Q96M32 723 aa5.95□□□□□ -1.46
SCARNA4-202ENST00000625402 PCDHGA10Q9Y5H3 936 aa5.95□□□□□ -1.46
SCARNA4-202ENST00000625402 ZNF316A6NFI3 1004 aaPredicted RBP5.94□□□□□ -1.46
SCARNA4-202ENST00000625402 EN1Q05925 392 aaPredicted RBP5.94□□□□□ -1.46
SCARNA4-202ENST00000625402 TSR1Q2NL82 804 aaKnown RBP5.94□□□□□ -1.46
SCARNA4-202ENST00000625402 GNPATO15228 680 aa5.93□□□□□ -1.46
SCARNA4-202ENST00000625402 MAP2K5Q13163 448 aa5.93□□□□□ -1.46
SCARNA4-202ENST00000625402 LHX8Q68G74 356 aa5.93□□□□□ -1.46
SCARNA4-202ENST00000625402 KRI1Q8N9T8 703 aaKnown RBP5.93□□□□□ -1.46
SCARNA4-202ENST00000625402 SLAIN1Q8ND83 568 aa5.93□□□□□ -1.46
SCARNA4-202ENST00000625402 NPDC1Q9NQX5 325 aaPredicted RBP5.93□□□□□ -1.46
SCARNA4-202ENST00000625402 FCHSD2O94868 740 aa5.92□□□□□ -1.46
SCARNA4-202ENST00000625402 PHF14O94880 888 aa5.92□□□□□ -1.46
SCARNA4-202ENST00000625402 PDE4DQ08499 809 aa5.92□□□□□ -1.46
SCARNA4-202ENST00000625402 HIC1Q14526 733 aa5.92□□□□□ -1.46
SCARNA4-202ENST00000625402 MAMSTRQ6ZN01 415 aa5.92□□□□□ -1.46
SCARNA4-202ENST00000625402 RBM33Q96EV2 1170 aaKnown RBP5.92□□□□□ -1.46
SCARNA4-202ENST00000625402 JPH4Q96JJ6 628 aa5.92□□□□□ -1.46
SCARNA4-202ENST00000625402 SCUBE2Q9NQ36 999 aa5.92□□□□□ -1.46
SCARNA4-202ENST00000625402 MAP3K7O43318 606 aa5.91□□□□□ -1.46
SCARNA4-202ENST00000625402 NUDT7P0C024 238 aa5.91□□□□□ -1.46
SCARNA4-202ENST00000625402 FOSBP53539 338 aa5.91□□□□□ -1.46
SCARNA4-202ENST00000625402 ARSIQ5FYB1 569 aa5.91□□□□□ -1.46
SCARNA4-202ENST00000625402 KDM4CQ9H3R0 1056 aa5.91□□□□□ -1.46
SCARNA4-202ENST00000625402 MINK1Q8N4C8 1332 aaPredicted RBP5.91□□□□□ -1.46
SCARNA4-202ENST00000625402 IRF6O14896 467 aa5.9□□□□□ -1.46
SCARNA4-202ENST00000625402 GPR153Q6NV75 609 aa5.9□□□□□ -1.46
SCARNA4-202ENST00000625402 EPAS1Q99814 870 aa5.9□□□□□ -1.46
SCARNA4-202ENST00000625402 AMHR2Q16671 573 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms