RNA–Protein interactions for RNA: ENST00000603474.1

LINC01588-215, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 3

Gene LINC01588, Length 269 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-215ENST00000603474 TRIM41Q8WV44 630 aa7.83□□□□□ -1.16
LINC01588-215ENST00000603474 SCUBE2Q9NQ36 999 aa7.83□□□□□ -1.16
LINC01588-215ENST00000603474 FLIIQ13045 1269 aa7.81□□□□□ -1.16
LINC01588-215ENST00000603474 RNF25Q96BH1 459 aaPredicted RBP7.81□□□□□ -1.16
LINC01588-215ENST00000603474 METRNQ9UJH8 293 aa7.81□□□□□ -1.16
LINC01588-215ENST00000603474 SPDYE2BA6NHP3 402 aa7.8□□□□□ -1.16
LINC01588-215ENST00000603474 SPDYE6P0CI01 402 aa7.8□□□□□ -1.16
LINC01588-215ENST00000603474 SPDYE2Q495Y8 402 aa7.8□□□□□ -1.16
LINC01588-215ENST00000603474 KDM4CQ9H3R0 1056 aa7.8□□□□□ -1.16
LINC01588-215ENST00000603474 FARP1Q9Y4F1 1045 aaPredicted RBP7.8□□□□□ -1.16
LINC01588-215ENST00000603474 TRAK2O60296 914 aa7.79□□□□□ -1.16
LINC01588-215ENST00000603474 FAM177A1Q8N128 213 aaPredicted RBP7.79□□□□□ -1.16
LINC01588-215ENST00000603474 RSPH4AQ5TD94 716 aa7.78□□□□□ -1.16
LINC01588-215ENST00000603474 FAM9AQ8IZU1 332 aaPredicted RBP7.78□□□□□ -1.16
LINC01588-215ENST00000603474 ZRANB1Q9UGI0 708 aa7.78□□□□□ -1.16
LINC01588-215ENST00000603474 A6NJR5 290 aa7.77□□□□□ -1.17
LINC01588-215ENST00000603474 BARGINQ6ZT62 677 aa7.77□□□□□ -1.17
LINC01588-215ENST00000603474 PRR29P0C7W0 189 aa7.76□□□□□ -1.17
LINC01588-215ENST00000603474 AK7Q96M32 723 aa7.76□□□□□ -1.17
LINC01588-215ENST00000603474 TESPA1A2RU30 521 aaPredicted RBP7.75□□□□□ -1.17
LINC01588-215ENST00000603474 FBXW7Q969H0 707 aa7.74□□□□□ -1.17
LINC01588-215ENST00000603474 CLUAP1Q96AJ1 413 aa7.74□□□□□ -1.17
LINC01588-215ENST00000603474 RYDENQ9NUL5 291 aaKnown RBP7.74□□□□□ -1.17
LINC01588-215ENST00000603474 STAG3Q9UJ98 1225 aa7.74□□□□□ -1.17
LINC01588-215ENST00000603474 STK25O00506 426 aa7.73□□□□□ -1.17
LINC01588-215ENST00000603474 SEMA3EO15041 775 aa7.73□□□□□ -1.17
LINC01588-215ENST00000603474 C7P10643 843 aa7.73□□□□□ -1.17
LINC01588-215ENST00000603474 ZNF692Q9BU19 519 aaPredicted RBP7.73□□□□□ -1.17
LINC01588-215ENST00000603474 RETREG2Q8NC44 543 aa7.72□□□□□ -1.17
LINC01588-215ENST00000603474 ARHGEF1Q92888 912 aaKnown RBP7.72□□□□□ -1.17
LINC01588-215ENST00000603474 IRF5Q13568 498 aa7.71□□□□□ -1.18
LINC01588-215ENST00000603474 CADPS2Q86UW7 1296 aa7.71□□□□□ -1.18
LINC01588-215ENST00000603474 MIER1Q8N108 512 aa7.71□□□□□ -1.18
LINC01588-215ENST00000603474 SLC39A7Q92504 469 aa7.71□□□□□ -1.18
LINC01588-215ENST00000603474 RIOK3O14730 519 aaKnown RBP7.7□□□□□ -1.18
LINC01588-215ENST00000603474 PDE4CQ08493 712 aa7.7□□□□□ -1.18
LINC01588-215ENST00000603474 TAF7LQ5H9L4 462 aa7.7□□□□□ -1.18
LINC01588-215ENST00000603474 ZNF316A6NFI3 1004 aaPredicted RBP7.69□□□□□ -1.18
LINC01588-215ENST00000603474 CCDC97Q96F63 343 aaPredicted RBP7.69□□□□□ -1.18
LINC01588-215ENST00000603474 SERPINA10Q9UK55 444 aa7.69□□□□□ -1.18
LINC01588-215ENST00000603474 PPM1GO15355 546 aaPredicted RBP7.68□□□□□ -1.18
LINC01588-215ENST00000603474 ST18O60284 1047 aa7.68□□□□□ -1.18
LINC01588-215ENST00000603474 ONECUT3O60422 494 aaPredicted RBP7.68□□□□□ -1.18
LINC01588-215ENST00000603474 ZNF777Q9ULD5 760 aaPredicted RBP7.67□□□□□ -1.18
LINC01588-215ENST00000603474 PDE4DQ08499 809 aa7.66□□□□□ -1.18
LINC01588-215ENST00000603474 KRI1Q8N9T8 703 aaKnown RBP7.65□□□□□ -1.18
LINC01588-215ENST00000603474 FAM117AQ9C073 453 aa7.65□□□□□ -1.18
LINC01588-215ENST00000603474 CCDC125Q86Z20 511 aa7.64□□□□□ -1.19
LINC01588-215ENST00000603474 CWC22Q9HCG8 908 aaKnown RBP7.64□□□□□ -1.19
LINC01588-215ENST00000603474 AMOTL2Q9Y2J4 779 aa7.64□□□□□ -1.19
LINC01588-215ENST00000603474 TRIM66O15016 1216 aa7.63□□□□□ -1.19
LINC01588-215ENST00000603474 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
LINC01588-215ENST00000603474 VGFO15240 615 aaPredicted RBP7.62□□□□□ -1.19
LINC01588-215ENST00000603474 ASTLQ6HA08 431 aaPredicted RBP7.61□□□□□ -1.19
LINC01588-215ENST00000603474 ZBTB47Q9UFB7 747 aaPredicted RBP7.61□□□□□ -1.19
LINC01588-215ENST00000603474 STK24Q9Y6E0 443 aa7.61□□□□□ -1.19
LINC01588-215ENST00000603474 PLEKHG3A1L390 1219 aa7.6□□□□□ -1.19
LINC01588-215ENST00000603474 PROSER2Q86WR7 435 aaPredicted RBP7.6□□□□□ -1.19
LINC01588-215ENST00000603474 MYT1LQ9UL68 1186 aa7.6□□□□□ -1.19
LINC01588-215ENST00000603474 PATL2C9JE40 543 aaKnown RBP7.59□□□□□ -1.19
LINC01588-215ENST00000603474 GSE1Q14687 1217 aa7.59□□□□□ -1.19
LINC01588-215ENST00000603474 BCL11BQ9C0K0 894 aaPredicted RBP7.59□□□□□ -1.19
LINC01588-215ENST00000603474 BCCIPQ9P287 314 aaKnown RBP eCLIP7.59□□□□□ -1.19
LINC01588-215ENST00000603474 ARID4BQ4LE39 1312 aaPredicted RBP7.58□□□□□ -1.2
LINC01588-215ENST00000603474 ATMINO43313 823 aaPredicted RBP7.58□□□□□ -1.2
LINC01588-215ENST00000603474 E2F4Q16254 413 aa7.58□□□□□ -1.2
LINC01588-215ENST00000603474 CERS3Q8IU89 383 aa7.57□□□□□ -1.2
LINC01588-215ENST00000603474 DDRGK1Q96HY6 314 aa7.57□□□□□ -1.2
LINC01588-215ENST00000603474 PHF12Q96QT6 1004 aa7.57□□□□□ -1.2
LINC01588-215ENST00000603474 ZNF592Q92610 1267 aa7.56□□□□□ -1.2
LINC01588-215ENST00000603474 CANXP27824 592 aaKnown RBP7.55□□□□□ -1.2
LINC01588-215ENST00000603474 MCM6Q14566 821 aa7.55□□□□□ -1.2
LINC01588-215ENST00000603474 PSMD1Q99460 953 aa7.55□□□□□ -1.2
LINC01588-215ENST00000603474 SSUH2Q9Y2M2 353 aa7.55□□□□□ -1.2
LINC01588-215ENST00000603474 TICAM2Q86XR7 235 aa7.54□□□□□ -1.2
LINC01588-215ENST00000603474 GPIHBP1Q8IV16 184 aa7.54□□□□□ -1.2
LINC01588-215ENST00000603474 ZFP91Q96JP5 570 aaPredicted RBP7.54□□□□□ -1.2
LINC01588-215ENST00000603474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.53□□□□□ -1.2
LINC01588-215ENST00000603474 NEFLP07196 543 aa7.53□□□□□ -1.2
LINC01588-215ENST00000603474 KCNA1Q09470 495 aa7.53□□□□□ -1.2
LINC01588-215ENST00000603474 CCDC27Q2M243 656 aa7.53□□□□□ -1.2
LINC01588-215ENST00000603474 FNBP4Q8N3X1 1017 aaPredicted RBP7.53□□□□□ -1.2
LINC01588-215ENST00000603474 UNCXA6NJT0 531 aa7.52□□□□□ -1.21
LINC01588-215ENST00000603474 CC2D2BQ6DHV5 1058 aa7.52□□□□□ -1.21
LINC01588-215ENST00000603474 SGIP1Q9BQI5 828 aa7.52□□□□□ -1.21
LINC01588-215ENST00000603474 IGSF5Q9NSI5 407 aa7.52□□□□□ -1.21
LINC01588-215ENST00000603474 ARIH1Q9Y4X5 557 aaPredicted RBP7.52□□□□□ -1.21
LINC01588-215ENST00000603474 BRPF3Q9ULD4 1205 aa7.51□□□□□ -1.21
LINC01588-215ENST00000603474 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.51□□□□□ -1.21
LINC01588-215ENST00000603474 POTEFA5A3E0 1075 aa7.5□□□□□ -1.21
LINC01588-215ENST00000603474 CLSTN1O94985 981 aa7.5□□□□□ -1.21
LINC01588-215ENST00000603474 RBM26Q5T8P6 1007 aaKnown RBP7.5□□□□□ -1.21
LINC01588-215ENST00000603474 PPP1R15AO75807 674 aaPredicted RBP7.49□□□□□ -1.21
LINC01588-215ENST00000603474 POM121Q96HA1 1249 aa7.49□□□□□ -1.21
LINC01588-215ENST00000603474 GOPCQ9HD26 462 aa7.48□□□□□ -1.21
LINC01588-215ENST00000603474 ACIN1Q9UKV3 1341 aaKnown RBP7.48□□□□□ -1.21
LINC01588-215ENST00000603474 SMARCA5O60264 1052 aaPredicted RBP7.47□□□□□ -1.21
LINC01588-215ENST00000603474 BRD1O95696 1058 aa7.47□□□□□ -1.21
LINC01588-215ENST00000603474 SPATA32Q96LK8 384 aa7.46□□□□□ -1.22
LINC01588-215ENST00000603474 CADPSQ9ULU8 1353 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms