RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
SMG6-210ENST00000572205 ITSN2Q9NZM3 1697 aa14.17□□□□□ -0.14
SMG6-210ENST00000572205 PLCH2O75038 1416 aa14.16□□□□□ -0.14
SMG6-210ENST00000572205 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
SMG6-210ENST00000572205 ABCC1P33527 1531 aa14.15□□□□□ -0.14
SMG6-210ENST00000572205 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
SMG6-210ENST00000572205 KDM5CP41229 1560 aa14.15□□□□□ -0.14
SMG6-210ENST00000572205 VPS8Q8N3P4 1428 aa14.15□□□□□ -0.14
SMG6-210ENST00000572205 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
SMG6-210ENST00000572205 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
SMG6-210ENST00000572205 PHLDB1Q86UU1 1377 aa14.12□□□□□ -0.15
SMG6-210ENST00000572205 PLEKHD1A6NEE1 506 aa14.12□□□□□ -0.15
SMG6-210ENST00000572205 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
SMG6-210ENST00000572205 POGZQ7Z3K3 1410 aa14.12□□□□□ -0.15
SMG6-210ENST00000572205 ARHGEF12Q9NZN5 1544 aa14.11□□□□□ -0.15
SMG6-210ENST00000572205 ADGRL1O94910 1474 aa14.1□□□□□ -0.15
SMG6-210ENST00000572205 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
SMG6-210ENST00000572205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
SMG6-210ENST00000572205 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
SMG6-210ENST00000572205 ARHGAP5Q13017 1502 aa14.09□□□□□ -0.15
SMG6-210ENST00000572205 GPATCH8Q9UKJ3 1502 aaKnown RBP14.09□□□□□ -0.15
SMG6-210ENST00000572205 SUPT6HQ7KZ85 1726 aaKnown RBP14.08□□□□□ -0.16
SMG6-210ENST00000572205 ABCA6Q8N139 1617 aa14.08□□□□□ -0.16
SMG6-210ENST00000572205 ADAMTSL3P82987 1691 aa14.07□□□□□ -0.16
SMG6-210ENST00000572205 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
SMG6-210ENST00000572205 BCORL1Q5H9F3 1711 aa14.07□□□□□ -0.16
SMG6-210ENST00000572205 HECW2Q9P2P5 1572 aa14.06□□□□□ -0.16
SMG6-210ENST00000572205 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
SMG6-210ENST00000572205 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
SMG6-210ENST00000572205 INO80Q9ULG1 1556 aaPredicted RBP14.05□□□□□ -0.16
SMG6-210ENST00000572205 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
SMG6-210ENST00000572205 ZFYVE16Q7Z3T8 1539 aa14.05□□□□□ -0.16
SMG6-210ENST00000572205 SYCP2Q9BX26 1530 aa14.05□□□□□ -0.16
SMG6-210ENST00000572205 YEATS2Q9ULM3 1422 aa14.04□□□□□ -0.16
SMG6-210ENST00000572205 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
SMG6-210ENST00000572205 RAPGEF3O95398 923 aa14.03□□□□□ -0.16
SMG6-210ENST00000572205 REREQ9P2R6 1566 aa14.03□□□□□ -0.16
SMG6-210ENST00000572205 NCOA2Q15596 1464 aa14.02□□□□□ -0.16
SMG6-210ENST00000572205 ZNF518AQ6AHZ1 1483 aa14.02□□□□□ -0.16
SMG6-210ENST00000572205 SCAPERQ9BY12 1400 aa14.02□□□□□ -0.16
SMG6-210ENST00000572205 KDM4FA0A1W2PPD8 638 aa14.02□□□□□ -0.17
SMG6-210ENST00000572205 ATP1B4Q9UN42 357 aaPredicted RBP14.02□□□□□ -0.17
SMG6-210ENST00000572205 MAGI2Q86UL8 1455 aa14.01□□□□□ -0.17
SMG6-210ENST00000572205 CDK11AQ9UQ88 783 aaPredicted RBP14.01□□□□□ -0.17
SMG6-210ENST00000572205 MADDQ8WXG6 1647 aa14.01□□□□□ -0.17
SMG6-210ENST00000572205 TRAPPC8Q9Y2L5 1435 aa14□□□□□ -0.17
SMG6-210ENST00000572205 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
SMG6-210ENST00000572205 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
SMG6-210ENST00000572205 MLH3Q9UHC1 1453 aa13.98□□□□□ -0.17
SMG6-210ENST00000572205 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
SMG6-210ENST00000572205 MBD5Q9P267 1494 aa13.97□□□□□ -0.17
SMG6-210ENST00000572205 CROCC2H7BZ55 1655 aa13.95□□□□□ -0.18
SMG6-210ENST00000572205 FER1L4A9Z1Z3 1794 aa13.95□□□□□ -0.18
SMG6-210ENST00000572205 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
SMG6-210ENST00000572205 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
SMG6-210ENST00000572205 ZBTB22O15209 634 aa13.94□□□□□ -0.18
SMG6-210ENST00000572205 ARHGEF5Q12774 1597 aa13.94□□□□□ -0.18
SMG6-210ENST00000572205 EFCAB2Q5VUJ9 269 aa13.94□□□□□ -0.18
SMG6-210ENST00000572205 RIMS1Q86UR5 1692 aaKnown RBP13.94□□□□□ -0.18
SMG6-210ENST00000572205 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
SMG6-210ENST00000572205 C9orf84Q5VXU9 1444 aa13.92□□□□□ -0.18
SMG6-210ENST00000572205 CCNB3Q8WWL7 1395 aa13.92□□□□□ -0.18
SMG6-210ENST00000572205 PLEKHH2Q8IVE3 1493 aa13.92□□□□□ -0.18
SMG6-210ENST00000572205 AGLP35573 1532 aa13.91□□□□□ -0.18
SMG6-210ENST00000572205 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
SMG6-210ENST00000572205 ATP10AO60312 1499 aa13.91□□□□□ -0.18
SMG6-210ENST00000572205 MAST1Q9Y2H9 1570 aa13.9□□□□□ -0.18
SMG6-210ENST00000572205 AFAP1Q8N556 730 aa13.88□□□□□ -0.19
SMG6-210ENST00000572205 MYOM3Q5VTT5 1437 aa13.88□□□□□ -0.19
SMG6-210ENST00000572205 PTPN23Q9H3S7 1636 aa13.87□□□□□ -0.19
SMG6-210ENST00000572205 ZNF644Q9H582 1327 aaPredicted RBP13.87□□□□□ -0.19
SMG6-210ENST00000572205 PTPRMP28827 1452 aa13.87□□□□□ -0.19
SMG6-210ENST00000572205 CCDC141Q6ZP82 1450 aa13.86□□□□□ -0.19
SMG6-210ENST00000572205 DNMT1P26358 1616 aaKnown RBP13.85□□□□□ -0.19
SMG6-210ENST00000572205 TCOF1Q13428 1488 aaKnown RBP13.85□□□□□ -0.19
SMG6-210ENST00000572205 MIA2Q96PC5 1412 aa13.84□□□□□ -0.19
SMG6-210ENST00000572205 MROH2AA6NES4 1674 aa13.84□□□□□ -0.19
SMG6-210ENST00000572205 C3P01024 1663 aa13.84□□□□□ -0.19
SMG6-210ENST00000572205 CFDP1Q9UEE9 299 aaPredicted RBP13.82□□□□□ -0.2
SMG6-210ENST00000572205 MROH1Q8NDA8 1641 aa13.82□□□□□ -0.2
SMG6-210ENST00000572205 RNF17Q9BXT8 1623 aaKnown RBP13.81□□□□□ -0.2
SMG6-210ENST00000572205 RTEL1-TNFRSF6BF6WH68 1400 aa13.81□□□□□ -0.2
SMG6-210ENST00000572205 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
SMG6-210ENST00000572205 HNRNPMP52272 730 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMG6-210ENST00000572205 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
SMG6-210ENST00000572205 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
SMG6-210ENST00000572205 A2MP01023 1474 aa13.79□□□□□ -0.2
SMG6-210ENST00000572205 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
SMG6-210ENST00000572205 PREX1Q8TCU6 1659 aa13.77□□□□□ -0.21
SMG6-210ENST00000572205 ZNF777Q9ULD5 760 aaPredicted RBP13.77□□□□□ -0.21
SMG6-210ENST00000572205 DEPDC5O75140 1603 aa13.76□□□□□ -0.21
SMG6-210ENST00000572205 LMTK3Q96Q04 1460 aa13.76□□□□□ -0.21
SMG6-210ENST00000572205 ABCC5O15440 1437 aa13.74□□□□□ -0.21
SMG6-210ENST00000572205 SPAG9O60271 1321 aaKnown RBP13.74□□□□□ -0.21
SMG6-210ENST00000572205 CNKSR2Q8WXI2 1034 aa13.73□□□□□ -0.21
SMG6-210ENST00000572205 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
SMG6-210ENST00000572205 DAPK1P53355 1430 aa13.73□□□□□ -0.21
SMG6-210ENST00000572205 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
SMG6-210ENST00000572205 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
SMG6-210ENST00000572205 PRDM15P57071 1507 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms