RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 NCKAP5LQ9HCH0 1330 aa12.42□□□□□ -0.42
CNOT1-222ENST00000570139 BARGINQ6ZT62 677 aa12.42□□□□□ -0.42
CNOT1-222ENST00000570139 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
CNOT1-222ENST00000570139 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.42
CNOT1-222ENST00000570139 SUPT5HO00267 1087 aaKnown RBP12.4□□□□□ -0.42
CNOT1-222ENST00000570139 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.42
CNOT1-222ENST00000570139 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.42
CNOT1-222ENST00000570139 POTEGQ6S5H5 508 aa12.38□□□□□ -0.43
CNOT1-222ENST00000570139 AK7Q96M32 723 aa12.38□□□□□ -0.43
CNOT1-222ENST00000570139 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
CNOT1-222ENST00000570139 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
CNOT1-222ENST00000570139 OTUD5Q96G74 571 aa12.36□□□□□ -0.43
CNOT1-222ENST00000570139 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
CNOT1-222ENST00000570139 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
CNOT1-222ENST00000570139 MAP3K13O43283 966 aa12.33□□□□□ -0.44
CNOT1-222ENST00000570139 GPIHBP1Q8IV16 184 aa12.33□□□□□ -0.44
CNOT1-222ENST00000570139 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
CNOT1-222ENST00000570139 KRI1Q8N9T8 703 aaKnown RBP12.31□□□□□ -0.44
CNOT1-222ENST00000570139 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
CNOT1-222ENST00000570139 MS4A4AQ96JQ5 239 aa12.27□□□□□ -0.45
CNOT1-222ENST00000570139 RBM26Q5T8P6 1007 aaKnown RBP12.25□□□□□ -0.45
CNOT1-222ENST00000570139 GPBP1L1Q9HC44 474 aaPredicted RBP12.25□□□□□ -0.45
CNOT1-222ENST00000570139 KDM4CQ9H3R0 1056 aa12.24□□□□□ -0.45
CNOT1-222ENST00000570139 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
CNOT1-222ENST00000570139 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
CNOT1-222ENST00000570139 ZMYND15Q9H091 742 aa12.22□□□□□ -0.45
CNOT1-222ENST00000570139 RSPH6AQ9H0K4 717 aa12.21□□□□□ -0.45
CNOT1-222ENST00000570139 MLLT3P42568 568 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-222ENST00000570139 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-222ENST00000570139 TRIM66O15016 1216 aa12.19□□□□□ -0.46
CNOT1-222ENST00000570139 PPP1R15BQ5SWA1 713 aa12.19□□□□□ -0.46
CNOT1-222ENST00000570139 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
CNOT1-222ENST00000570139 PDE4DQ08499 809 aa12.18□□□□□ -0.46
CNOT1-222ENST00000570139 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
CNOT1-222ENST00000570139 GPHNQ9NQX3 736 aaPredicted RBP12.16□□□□□ -0.46
CNOT1-222ENST00000570139 TMEM106CQ9BVX2 250 aa12.14□□□□□ -0.47
CNOT1-222ENST00000570139 PDIA6Q15084 440 aa12.13□□□□□ -0.47
CNOT1-222ENST00000570139 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-222ENST00000570139 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
CNOT1-222ENST00000570139 DPYSL4O14531 572 aa12.11□□□□□ -0.47
CNOT1-222ENST00000570139 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
CNOT1-222ENST00000570139 DDRGK1Q96HY6 314 aa12.08□□□□□ -0.48
CNOT1-222ENST00000570139 UBTFP17480 764 aaKnown RBP12.07□□□□□ -0.48
CNOT1-222ENST00000570139 MINK1Q8N4C8 1332 aaPredicted RBP12.07□□□□□ -0.48
CNOT1-222ENST00000570139 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
CNOT1-222ENST00000570139 GALR2O43603 387 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-222ENST00000570139 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
CNOT1-222ENST00000570139 EMILIN3Q9NT22 766 aa12.04□□□□□ -0.48
CNOT1-222ENST00000570139 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-222ENST00000570139 GPR37O15354 613 aa12.03□□□□□ -0.48
CNOT1-222ENST00000570139 FLIIQ13045 1269 aa12.03□□□□□ -0.48
CNOT1-222ENST00000570139 MAP2K5Q13163 448 aa12.02□□□□□ -0.49
CNOT1-222ENST00000570139 FAM117AQ9C073 453 aa12.02□□□□□ -0.49
CNOT1-222ENST00000570139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.498e-15■□□□□ 9
CNOT1-222ENST00000570139 RSF1Q96T23 1441 aaPredicted RBP12.02□□□□□ -0.49
CNOT1-222ENST00000570139 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
CNOT1-222ENST00000570139 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
CNOT1-222ENST00000570139 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
CNOT1-222ENST00000570139 DSG2Q14126 1118 aa12□□□□□ -0.49
CNOT1-222ENST00000570139 FOXK1P85037 733 aa11.99□□□□□ -0.49
CNOT1-222ENST00000570139 AMHR2Q16671 573 aa11.99□□□□□ -0.49
CNOT1-222ENST00000570139 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
CNOT1-222ENST00000570139 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
CNOT1-222ENST00000570139 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
CNOT1-222ENST00000570139 TIE1P35590 1138 aa11.97□□□□□ -0.49
CNOT1-222ENST00000570139 RANGAP1P46060 587 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-222ENST00000570139 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.49
CNOT1-222ENST00000570139 IRF6O14896 467 aa11.96□□□□□ -0.49
CNOT1-222ENST00000570139 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
CNOT1-222ENST00000570139 GOPCQ9HD26 462 aa11.95□□□□□ -0.5
CNOT1-222ENST00000570139 PLEKHG3A1L390 1219 aa11.94□□□□□ -0.5
CNOT1-222ENST00000570139 GRXCR2A6NFK2 248 aa11.93□□□□□ -0.5
CNOT1-222ENST00000570139 GNPATO15228 680 aa11.93□□□□□ -0.5
CNOT1-222ENST00000570139 LCE2DQ5TA82 110 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-222ENST00000570139 PARP9Q8IXQ6 854 aa11.93□□□□□ -0.5
CNOT1-222ENST00000570139 ARID3AQ99856 593 aa11.93□□□□□ -0.5
CNOT1-222ENST00000570139 HIC1Q14526 733 aa11.92□□□□□ -0.5
CNOT1-222ENST00000570139 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
CNOT1-222ENST00000570139 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
CNOT1-222ENST00000570139 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
CNOT1-222ENST00000570139 SMARCA2P51531 1590 aa11.91□□□□□ -0.5
CNOT1-222ENST00000570139 EIF4G1Q04637 1599 aaKnown RBP11.91□□□□□ -0.5
CNOT1-222ENST00000570139 WIZO95785 1651 aa11.91□□□□□ -0.5
CNOT1-222ENST00000570139 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
CNOT1-222ENST00000570139 FCHSD2O94868 740 aa11.9□□□□□ -0.5
CNOT1-222ENST00000570139 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
CNOT1-222ENST00000570139 PLPP6Q8IY26 295 aa11.9□□□□□ -0.5
CNOT1-222ENST00000570139 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
CNOT1-222ENST00000570139 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
CNOT1-222ENST00000570139 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
CNOT1-222ENST00000570139 C1orf115Q9H7X2 142 aa11.88□□□□□ -0.51
CNOT1-222ENST00000570139 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
CNOT1-222ENST00000570139 APBB1O00213 710 aa11.87□□□□□ -0.51
CNOT1-222ENST00000570139 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
CNOT1-222ENST00000570139 OSBPP22059 807 aa11.85□□□□□ -0.51
CNOT1-222ENST00000570139 POTEJP0CG39 1038 aa11.84□□□□□ -0.51
CNOT1-222ENST00000570139 PCMTD1Q96MG8 357 aaPredicted RBP11.84□□□□□ -0.51
CNOT1-222ENST00000570139 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
CNOT1-222ENST00000570139 G3V3G9 751 aa11.83□□□□□ -0.52
CNOT1-222ENST00000570139 PTGER2P43116 358 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms