RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 HCSTQ9UBK5 93 aa8.75□□□□□ -1.01
USP25-210ENST00000549362 CABP2Q9NPB3 220 aa8.73□□□□□ -1.01
USP25-210ENST00000549362 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
USP25-210ENST00000549362 ECM2O94769 699 aaPredicted RBP8.71□□□□□ -1.02
USP25-210ENST00000549362 GPR153Q6NV75 609 aa8.71□□□□□ -1.02
USP25-210ENST00000549362 PBX2P40425 430 aa8.66□□□□□ -1.02
USP25-210ENST00000549362 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.66□□□□□ -1.02
USP25-210ENST00000549362 ZNF316A6NFI3 1004 aaPredicted RBP8.65□□□□□ -1.02
USP25-210ENST00000549362 ARSIQ5FYB1 569 aa8.62□□□□□ -1.03
USP25-210ENST00000549362 CIZ1Q9ULV3 898 aaPredicted RBP8.61□□□□□ -1.03
USP25-210ENST00000549362 RGS20O76081 388 aa8.6□□□□□ -1.03
USP25-210ENST00000549362 BBXQ8WY36 941 aaPredicted RBP8.6□□□□□ -1.03
USP25-210ENST00000549362 MICALL2Q8IY33 904 aa8.59□□□□□ -1.03
USP25-210ENST00000549362 IRX2Q9BZI1 471 aaPredicted RBP8.58□□□□□ -1.04
USP25-210ENST00000549362 TMEM92Q6UXU6 159 aa8.57□□□□□ -1.04
USP25-210ENST00000549362 CFAP44Q96MT7 982 aa8.57□□□□□ -1.04
USP25-210ENST00000549362 PAXIP1Q6ZW49 1069 aaPredicted RBP8.56□□□□□ -1.04
USP25-210ENST00000549362 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
USP25-210ENST00000549362 RGL2O15211 777 aa8.55□□□□□ -1.04
USP25-210ENST00000549362 EFCAB3Q8N7B9 438 aa8.53□□□□□ -1.04
USP25-210ENST00000549362 BCANQ96GW7 911 aa8.52□□□□□ -1.05
USP25-210ENST00000549362 ADGRD1Q6QNK2 874 aa8.5□□□□□ -1.05
USP25-210ENST00000549362 KHSRPQ92945 711 aaKnown RBP eCLIP8.5□□□□□ -1.053e-7■■□□□ 12.8
USP25-210ENST00000549362 CHGAP10645 457 aaKnown RBP8.49□□□□□ -1.05
USP25-210ENST00000549362 SPRYD3Q8NCJ5 442 aa8.49□□□□□ -1.05
USP25-210ENST00000549362 TRIM41Q8WV44 630 aa8.48□□□□□ -1.05
USP25-210ENST00000549362 AXIN2Q9Y2T1 843 aa8.48□□□□□ -1.05
USP25-210ENST00000549362 SOX12O15370 315 aa8.47□□□□□ -1.05
USP25-210ENST00000549362 STAC3Q96MF2 364 aa8.46□□□□□ -1.06
USP25-210ENST00000549362 ARHGAP33O14559 1287 aa8.45□□□□□ -1.06
USP25-210ENST00000549362 NUDT7P0C024 238 aa8.45□□□□□ -1.06
USP25-210ENST00000549362 PSDA5PKW4 1024 aaPredicted RBP8.44□□□□□ -1.06
USP25-210ENST00000549362 TK2O00142 265 aa8.44□□□□□ -1.06
USP25-210ENST00000549362 IFFO2Q5TF58 517 aa8.44□□□□□ -1.06
USP25-210ENST00000549362 POTEEQ6S8J3 1075 aa8.44□□□□□ -1.06
USP25-210ENST00000549362 LHX6Q9UPM6 363 aa8.43□□□□□ -1.06
USP25-210ENST00000549362 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
USP25-210ENST00000549362 NISCHQ9Y2I1 1504 aa8.4□□□□□ -1.06
USP25-210ENST00000549362 TAOK2Q9UL54 1235 aa8.4□□□□□ -1.06
USP25-210ENST00000549362 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
USP25-210ENST00000549362 HRO43593 1189 aa8.38□□□□□ -1.07
USP25-210ENST00000549362 TSHZ2Q9NRE2 1034 aa8.38□□□□□ -1.07
USP25-210ENST00000549362 MS4A4AQ96JQ5 239 aa8.37□□□□□ -1.07
USP25-210ENST00000549362 A0A0G2JS52 829 aa8.36□□□□□ -1.07
USP25-210ENST00000549362 PCDHGA4Q9Y5G9 962 aa8.36□□□□□ -1.07
USP25-210ENST00000549362 SLC34A2O95436 690 aa8.35□□□□□ -1.07
USP25-210ENST00000549362 Q6ZNB5 142 aa8.35□□□□□ -1.07
USP25-210ENST00000549362 HS6ST3Q8IZP7 471 aa8.35□□□□□ -1.07
USP25-210ENST00000549362 PHF8Q9UPP1 1060 aa8.33□□□□□ -1.08
USP25-210ENST00000549362 RIOK3O14730 519 aaKnown RBP8.32□□□□□ -1.08
USP25-210ENST00000549362 PTPN5P54829 565 aa8.32□□□□□ -1.08
USP25-210ENST00000549362 KCNH8Q96L42 1107 aa8.32□□□□□ -1.08
USP25-210ENST00000549362 PRKCSHP14314 528 aaPredicted RBP8.31□□□□□ -1.08
USP25-210ENST00000549362 RNF25Q96BH1 459 aaPredicted RBP8.3□□□□□ -1.08
USP25-210ENST00000549362 KIF3CO14782 793 aa8.29□□□□□ -1.08
USP25-210ENST00000549362 NLRP6P59044 892 aa8.29□□□□□ -1.08
USP25-210ENST00000549362 DMRTA1Q5VZB9 504 aa8.29□□□□□ -1.08
USP25-210ENST00000549362 C2orf72A6NCS6 295 aa8.28□□□□□ -1.08
USP25-210ENST00000549362 STK25O00506 426 aa8.28□□□□□ -1.08
USP25-210ENST00000549362 VGFO15240 615 aaPredicted RBP8.28□□□□□ -1.08
USP25-210ENST00000549362 PSEN2P49810 448 aa8.27□□□□□ -1.09
USP25-210ENST00000549362 TPRNQ4KMQ1 711 aa8.26□□□□□ -1.09
USP25-210ENST00000549362 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
USP25-210ENST00000549362 NBR1Q14596 966 aa8.24□□□□□ -1.09
USP25-210ENST00000549362 DNAJC5Q9H3Z4 198 aa8.24□□□□□ -1.09
USP25-210ENST00000549362 LAPTM4AQ15012 233 aa8.23□□□□□ -1.09
USP25-210ENST00000549362 TMC2Q8TDI7 906 aa8.23□□□□□ -1.09
USP25-210ENST00000549362 STK24Q9Y6E0 443 aa8.23□□□□□ -1.09
USP25-210ENST00000549362 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.21□□□□□ -1.1
USP25-210ENST00000549362 ZFP91Q96JP5 570 aaPredicted RBP8.21□□□□□ -1.1
USP25-210ENST00000549362 GOLGA8CPA6NN73 597 aa8.2□□□□□ -1.1
USP25-210ENST00000549362 NKX1-1Q15270 411 aaPredicted RBP8.2□□□□□ -1.1
USP25-210ENST00000549362 THSD4Q6ZMP0 1018 aa8.2□□□□□ -1.1
USP25-210ENST00000549362 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
USP25-210ENST00000549362 BCL11BQ9C0K0 894 aaPredicted RBP8.19□□□□□ -1.1
USP25-210ENST00000549362 RYDENQ9NUL5 291 aaKnown RBP8.19□□□□□ -1.1
USP25-210ENST00000549362 VPS9D1Q9Y2B5 631 aa8.18□□□□□ -1.1
USP25-210ENST00000549362 FBXO22Q8NEZ5 403 aa8.17□□□□□ -1.1
USP25-210ENST00000549362 KCNK17Q96T54 332 aa8.17□□□□□ -1.1
USP25-210ENST00000549362 KDM4FA0A1W2PPD8 638 aa8.15□□□□□ -1.1
USP25-210ENST00000549362 PTCD2Q8WV60 388 aaKnown RBP8.15□□□□□ -1.1
USP25-210ENST00000549362 WNT2BQ93097 391 aa8.15□□□□□ -1.1
USP25-210ENST00000549362 TBC1D12O60347 775 aa8.14□□□□□ -1.11
USP25-210ENST00000549362 TRAF7Q6Q0C0 670 aa8.14□□□□□ -1.11
USP25-210ENST00000549362 SLC4A5Q9BY07 1137 aa8.14□□□□□ -1.11
USP25-210ENST00000549362 MRPL50Q8N5N7 158 aaKnown RBP8.12□□□□□ -1.11
USP25-210ENST00000549362 ITGBL1O95965 494 aaPredicted RBP8.1□□□□□ -1.11
USP25-210ENST00000549362 BHMG1C9JSJ3 638 aaPredicted RBP8.09□□□□□ -1.11
USP25-210ENST00000549362 MFRPQ9BY79 579 aa8.07□□□□□ -1.12
USP25-210ENST00000549362 NBPF3Q9H094 633 aa8.07□□□□□ -1.12
USP25-210ENST00000549362 GFRA3O60609 400 aa8.06□□□□□ -1.12
USP25-210ENST00000549362 WDR70Q9NW82 654 aa8.06□□□□□ -1.12
USP25-210ENST00000549362 BCL2L12Q9HB09 334 aa8.04□□□□□ -1.12
USP25-210ENST00000549362 PTPREP23469 700 aa8.03□□□□□ -1.12
USP25-210ENST00000549362 NYAP1Q6ZVC0 841 aa8.03□□□□□ -1.12
USP25-210ENST00000549362 P3H3Q8IVL6 736 aa8.02□□□□□ -1.13
USP25-210ENST00000549362 LCE2BO14633 110 aa8.01□□□□□ -1.13
USP25-210ENST00000549362 KCNC4Q03721 635 aa8.01□□□□□ -1.13
USP25-210ENST00000549362 ZNF787Q6DD87 383 aa8.01□□□□□ -1.13
USP25-210ENST00000549362 FOXK1P85037 733 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms