RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 GOPCQ9HD26 462 aa15.07■□□□□ 0
LRP6-205ENST00000540527 USP35Q9P2H5 1018 aa15.07■□□□□ 0
LRP6-205ENST00000540527 ZNF777Q9ULD5 760 aaPredicted RBP15.07■□□□□ 0
LRP6-205ENST00000540527 PROSER2Q86WR7 435 aaPredicted RBP15.06■□□□□ 0
LRP6-205ENST00000540527 RSPH4AQ5TD94 716 aa15.05■□□□□ -0
LRP6-205ENST00000540527 PATL2C9JE40 543 aaKnown RBP15.04■□□□□ -0
LRP6-205ENST00000540527 ARIH1Q9Y4X5 557 aaPredicted RBP15.03■□□□□ -0
LRP6-205ENST00000540527 FAM212AQ96EL1 285 aa15.02■□□□□ -0
LRP6-205ENST00000540527 AMOTL2Q9Y2J4 779 aa15.02■□□□□ -0
LRP6-205ENST00000540527 MCM6Q14566 821 aa15.01□□□□□ -0.01
LRP6-205ENST00000540527 RBM26Q5T8P6 1007 aaKnown RBP15□□□□□ -0.01
LRP6-205ENST00000540527 FNBP4Q8N3X1 1017 aaPredicted RBP14.98□□□□□ -0.01
LRP6-205ENST00000540527 PDE4CQ08493 712 aa14.96□□□□□ -0.01
LRP6-205ENST00000540527 FAM177A1Q8N128 213 aaPredicted RBP14.92□□□□□ -0.02
LRP6-205ENST00000540527 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
LRP6-205ENST00000540527 PPP1R15AO75807 674 aaPredicted RBP14.89□□□□□ -0.03
LRP6-205ENST00000540527 PLSCR2Q9NRY7 297 aa14.89□□□□□ -0.03
LRP6-205ENST00000540527 KCNA1Q09470 495 aa14.86□□□□□ -0.03
LRP6-205ENST00000540527 PCMTD1Q96MG8 357 aaPredicted RBP14.86□□□□□ -0.03
LRP6-205ENST00000540527 AMHR2Q16671 573 aa14.83□□□□□ -0.04
LRP6-205ENST00000540527 PARP9Q8IXQ6 854 aa14.82□□□□□ -0.04
LRP6-205ENST00000540527 MFRPQ9BY79 579 aa14.82□□□□□ -0.04
LRP6-205ENST00000540527 MLLT3P42568 568 aaPredicted RBP14.81□□□□□ -0.04
LRP6-205ENST00000540527 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
LRP6-205ENST00000540527 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
LRP6-205ENST00000540527 POM121Q96HA1 1249 aa14.79□□□□□ -0.04
LRP6-205ENST00000540527 BRD1O95696 1058 aa14.77□□□□□ -0.05
LRP6-205ENST00000540527 CCDC125Q86Z20 511 aa14.77□□□□□ -0.05
LRP6-205ENST00000540527 ACIN1Q9UKV3 1341 aaKnown RBP14.76□□□□□ -0.05
LRP6-205ENST00000540527 MFSD10Q14728 455 aa14.76□□□□□ -0.05
LRP6-205ENST00000540527 CCDC27Q2M243 656 aa14.76□□□□□ -0.05
LRP6-205ENST00000540527 NCKAP5LQ9HCH0 1330 aa14.74□□□□□ -0.05
LRP6-205ENST00000540527 PPP1R37O75864 691 aa14.74□□□□□ -0.05
LRP6-205ENST00000540527 PYGBP11216 843 aa14.74□□□□□ -0.05
LRP6-205ENST00000540527 BRD2P25440 801 aaKnown RBP14.74□□□□□ -0.05
LRP6-205ENST00000540527 GPR37O15354 613 aa14.73□□□□□ -0.05
LRP6-205ENST00000540527 CAPN15O75808 1086 aa14.73□□□□□ -0.05
LRP6-205ENST00000540527 CAMK2BQ13554 666 aa14.72□□□□□ -0.05
LRP6-205ENST00000540527 LARP6Q9BRS8 491 aaKnown RBP14.72□□□□□ -0.05
LRP6-205ENST00000540527 CCDC102AQ96A19 550 aa14.71□□□□□ -0.05
LRP6-205ENST00000540527 IGSF5Q9NSI5 407 aa14.71□□□□□ -0.05
LRP6-205ENST00000540527 CANXP27824 592 aaKnown RBP14.69□□□□□ -0.06
LRP6-205ENST00000540527 MAP2K5Q13163 448 aa14.69□□□□□ -0.06
LRP6-205ENST00000540527 POLR3GLQ9BT43 218 aa14.69□□□□□ -0.06
LRP6-205ENST00000540527 MYT1LQ9UL68 1186 aa14.69□□□□□ -0.06
LRP6-205ENST00000540527 PDE4AP27815 886 aa14.68□□□□□ -0.06
LRP6-205ENST00000540527 RASEFQ8IZ41 740 aa14.66□□□□□ -0.06
LRP6-205ENST00000540527 DHX37Q8IY37 1157 aaKnown RBP14.65□□□□□ -0.06
LRP6-205ENST00000540527 SH3D19Q5HYK7 790 aa14.64□□□□□ -0.07
LRP6-205ENST00000540527 USTQ9Y2C2 406 aa14.64□□□□□ -0.07
LRP6-205ENST00000540527 COG6Q9Y2V7 657 aa14.64□□□□□ -0.07
LRP6-205ENST00000540527 ZNF330Q9Y3S2 320 aaPredicted RBP14.64□□□□□ -0.07
LRP6-205ENST00000540527 IRF6O14896 467 aa14.63□□□□□ -0.07
LRP6-205ENST00000540527 PPM1GO15355 546 aaPredicted RBP14.63□□□□□ -0.07
LRP6-205ENST00000540527 ABCB7O75027 752 aa14.63□□□□□ -0.07
LRP6-205ENST00000540527 SND1Q7KZF4 910 aaKnown RBP eCLIP14.63□□□□□ -0.07
LRP6-205ENST00000540527 DDX27Q96GQ7 796 aaKnown RBP14.63□□□□□ -0.07
LRP6-205ENST00000540527 UNCXA6NJT0 531 aa14.62□□□□□ -0.07
LRP6-205ENST00000540527 PDAP1Q13442 181 aaKnown RBP14.61□□□□□ -0.07
LRP6-205ENST00000540527 ZNF467Q7Z7K2 595 aaPredicted RBP14.61□□□□□ -0.07
LRP6-205ENST00000540527 SPDYE5A6NIY4 337 aa14.58□□□□□ -0.08
LRP6-205ENST00000540527 CRISPLD2Q9H0B8 497 aa14.58□□□□□ -0.08
LRP6-205ENST00000540527 TTLL12Q14166 644 aaPredicted RBP14.57□□□□□ -0.08
LRP6-205ENST00000540527 FBXO22Q8NEZ5 403 aa14.57□□□□□ -0.08
LRP6-205ENST00000540527 RBM47A0AV96 593 aaKnown RBP14.54□□□□□ -0.08
LRP6-205ENST00000540527 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
LRP6-205ENST00000540527 NLRP6P59044 892 aa14.54□□□□□ -0.08
LRP6-205ENST00000540527 IVNS1ABPQ9Y6Y0 642 aa14.53□□□□□ -0.08
LRP6-205ENST00000540527 MS4A1P11836 297 aa14.52□□□□□ -0.09
LRP6-205ENST00000540527 OXER1Q8TDS5 423 aa14.52□□□□□ -0.09
LRP6-205ENST00000540527 GIGYF2Q6Y7W6 1299 aaKnown RBP14.5□□□□□ -0.09
LRP6-205ENST00000540527 PBXIP1Q96AQ6 731 aa14.5□□□□□ -0.09
LRP6-205ENST00000540527 SKIV2LQ15477 1246 aaKnown RBP14.48□□□□□ -0.09
LRP6-205ENST00000540527 CALR3Q96L12 384 aaKnown RBP14.48□□□□□ -0.09
LRP6-205ENST00000540527 CSB-PGBD3P0DP91 1061 aa14.47□□□□□ -0.09
LRP6-205ENST00000540527 UBE2Q2Q8WVN8 375 aa14.47□□□□□ -0.09
LRP6-205ENST00000540527 SPDYE16A6NNV3 312 aaPredicted RBP14.46□□□□□ -0.09
LRP6-205ENST00000540527 CWC22Q9HCG8 908 aaKnown RBP14.46□□□□□ -0.09
LRP6-205ENST00000540527 GNPATO15228 680 aa14.43□□□□□ -0.1
LRP6-205ENST00000540527 TBC1D12O60347 775 aa14.42□□□□□ -0.1
LRP6-205ENST00000540527 PDIA6Q15084 440 aa14.42□□□□□ -0.1
LRP6-205ENST00000540527 BANK1Q8NDB2 785 aa14.42□□□□□ -0.1
LRP6-205ENST00000540527 SPATA32Q96LK8 384 aa14.42□□□□□ -0.1
LRP6-205ENST00000540527 SOX12O15370 315 aa14.41□□□□□ -0.1
LRP6-205ENST00000540527 CREBZFQ9NS37 354 aa14.41□□□□□ -0.1
LRP6-205ENST00000540527 WWC1Q8IX03 1113 aa14.4□□□□□ -0.1
LRP6-205ENST00000540527 GLMNQ92990 594 aa14.39□□□□□ -0.11
LRP6-205ENST00000540527 KIAA1522Q9P206 1035 aaPredicted RBP14.39□□□□□ -0.11
LRP6-205ENST00000540527 PSEN1P49768 467 aa14.38□□□□□ -0.11
LRP6-205ENST00000540527 DRC1Q96MC2 740 aa14.38□□□□□ -0.11
LRP6-205ENST00000540527 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
LRP6-205ENST00000540527 NUTM2FA1L443 756 aa14.36□□□□□ -0.11
LRP6-205ENST00000540527 SMARCA5O60264 1052 aaPredicted RBP14.35□□□□□ -0.11
LRP6-205ENST00000540527 NCLP19338 710 aaKnown RBP14.35□□□□□ -0.11
LRP6-205ENST00000540527 HIC1Q14526 733 aa14.35□□□□□ -0.11
LRP6-205ENST00000540527 FAM9AQ8IZU1 332 aaPredicted RBP14.35□□□□□ -0.11
LRP6-205ENST00000540527 MRRFQ96E11 262 aaKnown RBP14.35□□□□□ -0.11
LRP6-205ENST00000540527 PROCA1Q8NCQ7 364 aaPredicted RBP14.34□□□□□ -0.11
LRP6-205ENST00000540527 SNRKQ9NRH2 765 aa14.34□□□□□ -0.11
LRP6-205ENST00000540527 DPYSL4O14531 572 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms