RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 TAOK2Q9UL54 1235 aa10.65□□□□□ -0.7
CLDND1-228ENST00000513873 PLA2G2EQ9NZK7 142 aa10.6□□□□□ -0.71
CLDND1-228ENST00000513873 RIOK3O14730 519 aaKnown RBP10.58□□□□□ -0.72
CLDND1-228ENST00000513873 RGL2O15211 777 aa10.57□□□□□ -0.72
CLDND1-228ENST00000513873 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
CLDND1-228ENST00000513873 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
CLDND1-228ENST00000513873 LSM11P83369 360 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLDND1-228ENST00000513873 HCSTQ9UBK5 93 aa10.53□□□□□ -0.72
CLDND1-228ENST00000513873 ZNF316A6NFI3 1004 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-228ENST00000513873 ARSIQ5FYB1 569 aa10.48□□□□□ -0.73
CLDND1-228ENST00000513873 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-228ENST00000513873 MICALL2Q8IY33 904 aa10.47□□□□□ -0.73
CLDND1-228ENST00000513873 PBX2P40425 430 aa10.46□□□□□ -0.73
CLDND1-228ENST00000513873 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
CLDND1-228ENST00000513873 STK25O00506 426 aa10.44□□□□□ -0.74
CLDND1-228ENST00000513873 EFCAB3Q8N7B9 438 aa10.44□□□□□ -0.74
CLDND1-228ENST00000513873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.42□□□□□ -0.74
CLDND1-228ENST00000513873 ZFP91Q96JP5 570 aaPredicted RBP10.42□□□□□ -0.74
CLDND1-228ENST00000513873 TMEM92Q6UXU6 159 aa10.41□□□□□ -0.74
CLDND1-228ENST00000513873 STK24Q9Y6E0 443 aa10.41□□□□□ -0.74
CLDND1-228ENST00000513873 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-228ENST00000513873 HS6ST3Q8IZP7 471 aa10.37□□□□□ -0.75
CLDND1-228ENST00000513873 SOX12O15370 315 aa10.36□□□□□ -0.75
CLDND1-228ENST00000513873 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
CLDND1-228ENST00000513873 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.762e-9■■■□□ 15.3
CLDND1-228ENST00000513873 BBXQ8WY36 941 aaPredicted RBP10.32□□□□□ -0.76
CLDND1-228ENST00000513873 AXIN2Q9Y2T1 843 aa10.3□□□□□ -0.76
CLDND1-228ENST00000513873 ADGRD1Q6QNK2 874 aa10.29□□□□□ -0.76
CLDND1-228ENST00000513873 STAC3Q96MF2 364 aa10.29□□□□□ -0.76
CLDND1-228ENST00000513873 RGS20O76081 388 aa10.28□□□□□ -0.76
CLDND1-228ENST00000513873 NUDT7P0C024 238 aa10.28□□□□□ -0.76
CLDND1-228ENST00000513873 IRX2Q9BZI1 471 aaPredicted RBP10.28□□□□□ -0.76
CLDND1-228ENST00000513873 RYDENQ9NUL5 291 aaKnown RBP10.27□□□□□ -0.77
CLDND1-228ENST00000513873 ARHGAP33O14559 1287 aa10.25□□□□□ -0.77
CLDND1-228ENST00000513873 PSDA5PKW4 1024 aaPredicted RBP10.24□□□□□ -0.77
CLDND1-228ENST00000513873 DNAJC5Q9H3Z4 198 aa10.24□□□□□ -0.77
CLDND1-228ENST00000513873 LHX6Q9UPM6 363 aa10.24□□□□□ -0.77
CLDND1-228ENST00000513873 SPRYD3Q8NCJ5 442 aa10.22□□□□□ -0.77
CLDND1-228ENST00000513873 MS4A4AQ96JQ5 239 aa10.22□□□□□ -0.77
CLDND1-228ENST00000513873 PHF8Q9UPP1 1060 aa10.22□□□□□ -0.77
CLDND1-228ENST00000513873 NLRP6P59044 892 aa10.21□□□□□ -0.77
CLDND1-228ENST00000513873 TK2O00142 265 aa10.2□□□□□ -0.78
CLDND1-228ENST00000513873 KCTD12Q96CX2 325 aaKnown RBP10.2□□□□□ -0.78
CLDND1-228ENST00000513873 CFAP44Q96MT7 982 aa10.2□□□□□ -0.78
CLDND1-228ENST00000513873 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
CLDND1-228ENST00000513873 PAXIP1Q6ZW49 1069 aaPredicted RBP10.19□□□□□ -0.78
CLDND1-228ENST00000513873 PCDHGA4Q9Y5G9 962 aa10.18□□□□□ -0.78
CLDND1-228ENST00000513873 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
CLDND1-228ENST00000513873 SLC34A2O95436 690 aa10.14□□□□□ -0.79
CLDND1-228ENST00000513873 KCNH8Q96L42 1107 aa10.14□□□□□ -0.79
CLDND1-228ENST00000513873 MFRPQ9BY79 579 aa10.13□□□□□ -0.79
CLDND1-228ENST00000513873 C2orf72A6NCS6 295 aa10.12□□□□□ -0.79
CLDND1-228ENST00000513873 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
CLDND1-228ENST00000513873 HRO43593 1189 aa10.11□□□□□ -0.79
CLDND1-228ENST00000513873 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-228ENST00000513873 IFFO2Q5TF58 517 aa10.1□□□□□ -0.79
CLDND1-228ENST00000513873 PTPN5P54829 565 aa10.09□□□□□ -0.79
CLDND1-228ENST00000513873 TMC2Q8TDI7 906 aa10.09□□□□□ -0.79
CLDND1-228ENST00000513873 KIF3CO14782 793 aa10.08□□□□□ -0.8
CLDND1-228ENST00000513873 FBXO22Q8NEZ5 403 aa10.08□□□□□ -0.8
CLDND1-228ENST00000513873 PSEN2P49810 448 aa10.06□□□□□ -0.8
CLDND1-228ENST00000513873 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
CLDND1-228ENST00000513873 DMRTA1Q5VZB9 504 aa10.06□□□□□ -0.8
CLDND1-228ENST00000513873 A0A0G2JS52 829 aa10.04□□□□□ -0.8
CLDND1-228ENST00000513873 HAP1P54257 671 aaPredicted RBP10.04□□□□□ -0.8
CLDND1-228ENST00000513873 Q6ZNB5 142 aa10.03□□□□□ -0.8
CLDND1-228ENST00000513873 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
CLDND1-228ENST00000513873 PPP1R37O75864 691 aa9.99□□□□□ -0.81
CLDND1-228ENST00000513873 KCNK17Q96T54 332 aa9.97□□□□□ -0.81
CLDND1-228ENST00000513873 TBC1D12O60347 775 aa9.95□□□□□ -0.82
CLDND1-228ENST00000513873 THSD4Q6ZMP0 1018 aa9.93□□□□□ -0.82
CLDND1-228ENST00000513873 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
CLDND1-228ENST00000513873 VPS9D1Q9Y2B5 631 aa9.93□□□□□ -0.82
CLDND1-228ENST00000513873 PTCD2Q8WV60 388 aaKnown RBP9.92□□□□□ -0.82
CLDND1-228ENST00000513873 SLC24A1O60721 1099 aa9.91□□□□□ -0.82
CLDND1-228ENST00000513873 WNT2BQ93097 391 aa9.9□□□□□ -0.82
CLDND1-228ENST00000513873 KDM4FA0A1W2PPD8 638 aa9.89□□□□□ -0.83
CLDND1-228ENST00000513873 PDE4AP27815 886 aa9.89□□□□□ -0.83
CLDND1-228ENST00000513873 LAPTM4AQ15012 233 aa9.88□□□□□ -0.83
CLDND1-228ENST00000513873 MRPL50Q8N5N7 158 aaKnown RBP9.88□□□□□ -0.83
CLDND1-228ENST00000513873 WDR70Q9NW82 654 aa9.88□□□□□ -0.83
CLDND1-228ENST00000513873 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
CLDND1-228ENST00000513873 SLC4A5Q9BY07 1137 aa9.86□□□□□ -0.83
CLDND1-228ENST00000513873 NBPF3Q9H094 633 aa9.83□□□□□ -0.84
CLDND1-228ENST00000513873 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
CLDND1-228ENST00000513873 CADPS2Q86UW7 1296 aa9.81□□□□□ -0.84
CLDND1-228ENST00000513873 PTPREP23469 700 aa9.8□□□□□ -0.84
CLDND1-228ENST00000513873 PLPP6Q8IY26 295 aa9.8□□□□□ -0.84
CLDND1-228ENST00000513873 GPHNQ9NQX3 736 aaPredicted RBP9.8□□□□□ -0.84
CLDND1-228ENST00000513873 BHMG1C9JSJ3 638 aaPredicted RBP9.79□□□□□ -0.84
CLDND1-228ENST00000513873 FOXK1P85037 733 aa9.79□□□□□ -0.84
CLDND1-228ENST00000513873 ZNF454Q8N9F8 522 aa9.78□□□□□ -0.84
CLDND1-228ENST00000513873 DDX27Q96GQ7 796 aaKnown RBP9.78□□□□□ -0.84
CLDND1-228ENST00000513873 CRISPLD2Q9H0B8 497 aa9.78□□□□□ -0.84
CLDND1-228ENST00000513873 BCL2L12Q9HB09 334 aa9.78□□□□□ -0.84
CLDND1-228ENST00000513873 TRAF7Q6Q0C0 670 aa9.77□□□□□ -0.85
CLDND1-228ENST00000513873 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
CLDND1-228ENST00000513873 NCKAP5LQ9HCH0 1330 aa9.76□□□□□ -0.85
CLDND1-228ENST00000513873 PPP1R15BQ5SWA1 713 aa9.74□□□□□ -0.85
CLDND1-228ENST00000513873 ANKK1Q8NFD2 765 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms