RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 CAMK2BQ13554 666 aa9.53□□□□□ -0.88
NIPBL-207ENST00000513819 PPP1R15BQ5SWA1 713 aa9.53□□□□□ -0.88
NIPBL-207ENST00000513819 OCEL1Q9H607 264 aa9.53□□□□□ -0.88
NIPBL-207ENST00000513819 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-207ENST00000513819 TULP1O00294 542 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-207ENST00000513819 IER5LQ5T953 404 aa9.51□□□□□ -0.89
NIPBL-207ENST00000513819 PLCG2P16885 1265 aa9.49□□□□□ -0.89
NIPBL-207ENST00000513819 DSG2Q14126 1118 aa9.49□□□□□ -0.89
NIPBL-207ENST00000513819 BOLA1Q9Y3E2 137 aa9.49□□□□□ -0.89
NIPBL-207ENST00000513819 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
NIPBL-207ENST00000513819 TMC2Q8TDI7 906 aa9.48□□□□□ -0.89
NIPBL-207ENST00000513819 ARIH1Q9Y4X5 557 aaPredicted RBP9.48□□□□□ -0.89
NIPBL-207ENST00000513819 G3V3G9 751 aa9.47□□□□□ -0.89
NIPBL-207ENST00000513819 TMEM121BQ9BXQ6 578 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-207ENST00000513819 PLSCR2Q9NRY7 297 aa9.47□□□□□ -0.89
NIPBL-207ENST00000513819 DCBLD2Q96PD2 775 aa9.46□□□□□ -0.9
NIPBL-207ENST00000513819 EMILIN3Q9NT22 766 aa9.45□□□□□ -0.9
NIPBL-207ENST00000513819 C2orf72A6NCS6 295 aa9.44□□□□□ -0.9
NIPBL-207ENST00000513819 POTEIP0CG38 1075 aa9.44□□□□□ -0.9
NIPBL-207ENST00000513819 FOXK1P85037 733 aa9.44□□□□□ -0.9
NIPBL-207ENST00000513819 COLQQ9Y215 455 aaPredicted RBP9.44□□□□□ -0.9
NIPBL-207ENST00000513819 DPYSL4O14531 572 aa9.43□□□□□ -0.9
NIPBL-207ENST00000513819 SEC24BO95487 1268 aa9.43□□□□□ -0.9
NIPBL-207ENST00000513819 SMYD5Q6GMV2 418 aa9.42□□□□□ -0.9
NIPBL-207ENST00000513819 PLPP6Q8IY26 295 aa9.42□□□□□ -0.9
NIPBL-207ENST00000513819 ZC3H15Q8WU90 426 aaKnown RBP9.42□□□□□ -0.9
NIPBL-207ENST00000513819 L3MBTL3Q96JM7 780 aaPredicted RBP9.42□□□□□ -0.9
NIPBL-207ENST00000513819 KIF3CO14782 793 aa9.41□□□□□ -0.9
NIPBL-207ENST00000513819 MLLT3P42568 568 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-207ENST00000513819 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
NIPBL-207ENST00000513819 TMEM92Q6UXU6 159 aa9.39□□□□□ -0.91
NIPBL-207ENST00000513819 SLC39A7Q92504 469 aa9.39□□□□□ -0.91
NIPBL-207ENST00000513819 PDIA6Q15084 440 aa9.36□□□□□ -0.91
NIPBL-207ENST00000513819 RBM26Q5T8P6 1007 aaKnown RBP9.36□□□□□ -0.91
NIPBL-207ENST00000513819 SPDYE16A6NNV3 312 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-207ENST00000513819 C7P10643 843 aa9.35□□□□□ -0.91
NIPBL-207ENST00000513819 METRNQ9UJH8 293 aa9.35□□□□□ -0.91
NIPBL-207ENST00000513819 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
NIPBL-207ENST00000513819 SLC24A3Q9HC58 644 aa9.33□□□□□ -0.92
NIPBL-207ENST00000513819 MAP3K9P80192 1104 aa9.32□□□□□ -0.92
NIPBL-207ENST00000513819 ZMYND10O75800 440 aa9.31□□□□□ -0.92
NIPBL-207ENST00000513819 GPIHBP1Q8IV16 184 aa9.3□□□□□ -0.92
NIPBL-207ENST00000513819 C3orf67Q6ZVT6 689 aa9.29□□□□□ -0.92
NIPBL-207ENST00000513819 GRXCR2A6NFK2 248 aa9.28□□□□□ -0.92
NIPBL-207ENST00000513819 OXER1Q8TDS5 423 aa9.28□□□□□ -0.92
NIPBL-207ENST00000513819 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-207ENST00000513819 BARGINQ6ZT62 677 aa9.26□□□□□ -0.93
NIPBL-207ENST00000513819 NEUROD2Q15784 382 aa9.23□□□□□ -0.93
NIPBL-207ENST00000513819 TBC1D12O60347 775 aa9.22□□□□□ -0.93
NIPBL-207ENST00000513819 DDX12PQ92771 950 aa9.22□□□□□ -0.93
NIPBL-207ENST00000513819 EVI5O60447 810 aa9.21□□□□□ -0.94
NIPBL-207ENST00000513819 TMEM132AQ24JP5 1023 aa9.21□□□□□ -0.94
NIPBL-207ENST00000513819 KRI1Q8N9T8 703 aaKnown RBP9.21□□□□□ -0.94
NIPBL-207ENST00000513819 OSBPP22059 807 aa9.2□□□□□ -0.94
NIPBL-207ENST00000513819 PTCD2Q8WV60 388 aaKnown RBP9.2□□□□□ -0.94
NIPBL-207ENST00000513819 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.2□□□□□ -0.94
NIPBL-207ENST00000513819 NUTM2FA1L443 756 aa9.19□□□□□ -0.94
NIPBL-207ENST00000513819 GPR37O15354 613 aa9.19□□□□□ -0.94
NIPBL-207ENST00000513819 PTGER2P43116 358 aa9.19□□□□□ -0.94
NIPBL-207ENST00000513819 OTUD5Q96G74 571 aa9.18□□□□□ -0.94
NIPBL-207ENST00000513819 AK7Q96M32 723 aa9.18□□□□□ -0.94
NIPBL-207ENST00000513819 POTEMA6NI47 508 aa9.16□□□□□ -0.94
NIPBL-207ENST00000513819 SLC34A2O95436 690 aa9.16□□□□□ -0.94
NIPBL-207ENST00000513819 PRIM1P49642 420 aaKnown RBP9.16□□□□□ -0.94
NIPBL-207ENST00000513819 ZNF316A6NFI3 1004 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-207ENST00000513819 GTF3C3Q9Y5Q9 886 aa9.14□□□□□ -0.95
NIPBL-207ENST00000513819 POTEB2H3BUK9 544 aa9.12□□□□□ -0.95
NIPBL-207ENST00000513819 TRIM66O15016 1216 aa9.12□□□□□ -0.95
NIPBL-207ENST00000513819 ANO8Q9HCE9 1232 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-207ENST00000513819 PCDHGA4Q9Y5G9 962 aa9.12□□□□□ -0.95
NIPBL-207ENST00000513819 POTEJP0CG39 1038 aa9.11□□□□□ -0.95
NIPBL-207ENST00000513819 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
NIPBL-207ENST00000513819 GPBP1L1Q9HC44 474 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-207ENST00000513819 FCHSD2O94868 740 aa9.1□□□□□ -0.95
NIPBL-207ENST00000513819 GNPATO15228 680 aa9.09□□□□□ -0.95
NIPBL-207ENST00000513819 FECHP22830 423 aa9.09□□□□□ -0.95
NIPBL-207ENST00000513819 PDE4DQ08499 809 aa9.08□□□□□ -0.96
NIPBL-207ENST00000513819 HIC1Q14526 733 aa9.08□□□□□ -0.96
NIPBL-207ENST00000513819 MINK1Q8N4C8 1332 aaPredicted RBP9.07□□□□□ -0.96
NIPBL-207ENST00000513819 PHF14O94880 888 aa9.07□□□□□ -0.96
NIPBL-207ENST00000513819 MAP2K5Q13163 448 aa9.07□□□□□ -0.96
NIPBL-207ENST00000513819 PTGDRQ13258 359 aa9.07□□□□□ -0.96
NIPBL-207ENST00000513819 CCDC102AQ96A19 550 aa9.07□□□□□ -0.96
NIPBL-207ENST00000513819 CDHR5Q9HBB8 845 aa9.07□□□□□ -0.96
NIPBL-207ENST00000513819 EN1Q05925 392 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-207ENST00000513819 RBM33Q96EV2 1170 aaKnown RBP9.06□□□□□ -0.96
NIPBL-207ENST00000513819 EPAS1Q99814 870 aa9.06□□□□□ -0.96
NIPBL-207ENST00000513819 PCDHGA10Q9Y5H3 936 aa9.06□□□□□ -0.96
NIPBL-207ENST00000513819 IRF6O14896 467 aa9.05□□□□□ -0.96
NIPBL-207ENST00000513819 MAP3K7O43318 606 aa9.05□□□□□ -0.96
NIPBL-207ENST00000513819 KDM4CQ9H3R0 1056 aa9.05□□□□□ -0.96
NIPBL-207ENST00000513819 KDM4FA0A1W2PPD8 638 aa9.04□□□□□ -0.96
NIPBL-207ENST00000513819 SLAIN1Q8ND83 568 aa9.04□□□□□ -0.96
NIPBL-207ENST00000513819 KHSRPQ92945 711 aaKnown RBP eCLIP9.04□□□□□ -0.966e-8■□□□□ 10.2
NIPBL-207ENST00000513819 TSR1Q2NL82 804 aaKnown RBP9.03□□□□□ -0.96
NIPBL-207ENST00000513819 PCDH10Q9P2E7 1040 aa9.03□□□□□ -0.96
NIPBL-207ENST00000513819 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
NIPBL-207ENST00000513819 HOXB3P14651 431 aaPredicted RBP9.02□□□□□ -0.97
NIPBL-207ENST00000513819 TYW1BQ6NUM6 668 aa9.02□□□□□ -0.97
NIPBL-207ENST00000513819 IL27Q8NEV9 243 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms