RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 MICALL2Q8IY33 904 aa7.83□□□□□ -1.16
RNU6-278P-201ENST00000390945 DDX27Q96GQ7 796 aaKnown RBP7.82□□□□□ -1.16
RNU6-278P-201ENST00000390945 POTEFA5A3E0 1075 aa7.81□□□□□ -1.16
RNU6-278P-201ENST00000390945 KIF3CO14782 793 aa7.81□□□□□ -1.16
RNU6-278P-201ENST00000390945 POTEIP0CG38 1075 aa7.81□□□□□ -1.16
RNU6-278P-201ENST00000390945 TESPA1A2RU30 521 aaPredicted RBP7.8□□□□□ -1.16
RNU6-278P-201ENST00000390945 FOXK1P85037 733 aa7.79□□□□□ -1.16
RNU6-278P-201ENST00000390945 COLQQ9Y215 455 aaPredicted RBP7.79□□□□□ -1.16
RNU6-278P-201ENST00000390945 BOLA1Q9Y3E2 137 aa7.79□□□□□ -1.16
RNU6-278P-201ENST00000390945 SP7Q8TDD2 431 aaPredicted RBP7.78□□□□□ -1.16
RNU6-278P-201ENST00000390945 SEMA3EO15041 775 aa7.77□□□□□ -1.17
RNU6-278P-201ENST00000390945 DSG2Q14126 1118 aa7.77□□□□□ -1.17
RNU6-278P-201ENST00000390945 PPP1R15BQ5SWA1 713 aa7.77□□□□□ -1.17
RNU6-278P-201ENST00000390945 C7P10643 843 aa7.76□□□□□ -1.17
RNU6-278P-201ENST00000390945 L3MBTL3Q96JM7 780 aaPredicted RBP7.76□□□□□ -1.17
RNU6-278P-201ENST00000390945 DCBLD2Q96PD2 775 aa7.76□□□□□ -1.17
RNU6-278P-201ENST00000390945 SLC39A7Q92504 469 aa7.75□□□□□ -1.17
RNU6-278P-201ENST00000390945 EMILIN3Q9NT22 766 aa7.75□□□□□ -1.17
RNU6-278P-201ENST00000390945 PLCG2P16885 1265 aa7.74□□□□□ -1.17
RNU6-278P-201ENST00000390945 LMOD2Q6P5Q4 547 aa7.74□□□□□ -1.17
RNU6-278P-201ENST00000390945 TMEM92Q6UXU6 159 aa7.74□□□□□ -1.17
RNU6-278P-201ENST00000390945 C2orf72A6NCS6 295 aa7.73□□□□□ -1.17
RNU6-278P-201ENST00000390945 PLPP6Q8IY26 295 aa7.71□□□□□ -1.18
RNU6-278P-201ENST00000390945 TMC2Q8TDI7 906 aa7.71□□□□□ -1.18
RNU6-278P-201ENST00000390945 SPDYE16A6NNV3 312 aaPredicted RBP7.69□□□□□ -1.18
RNU6-278P-201ENST00000390945 SEC24BO95487 1268 aa7.69□□□□□ -1.18
RNU6-278P-201ENST00000390945 ZC3H15Q8WU90 426 aaKnown RBP7.68□□□□□ -1.18
RNU6-278P-201ENST00000390945 PDIA6Q15084 440 aa7.67□□□□□ -1.18
RNU6-278P-201ENST00000390945 SMYD5Q6GMV2 418 aa7.67□□□□□ -1.18
RNU6-278P-201ENST00000390945 METRNQ9UJH8 293 aa7.67□□□□□ -1.18
RNU6-278P-201ENST00000390945 DPYSL4O14531 572 aa7.66□□□□□ -1.18
RNU6-278P-201ENST00000390945 MLLT3P42568 568 aaPredicted RBP7.66□□□□□ -1.18
RNU6-278P-201ENST00000390945 OXER1Q8TDS5 423 aa7.66□□□□□ -1.18
RNU6-278P-201ENST00000390945 G3V3G9 751 aa7.65□□□□□ -1.18
RNU6-278P-201ENST00000390945 TULP1O00294 542 aaPredicted RBP7.64□□□□□ -1.19
RNU6-278P-201ENST00000390945 ZMYND10O75800 440 aa7.64□□□□□ -1.19
RNU6-278P-201ENST00000390945 PTGER2P43116 358 aa7.63□□□□□ -1.19
RNU6-278P-201ENST00000390945 SLC34A2O95436 690 aa7.62□□□□□ -1.19
RNU6-278P-201ENST00000390945 PTCD2Q8WV60 388 aaKnown RBP7.62□□□□□ -1.19
RNU6-278P-201ENST00000390945 ANO8Q9HCE9 1232 aaPredicted RBP7.61□□□□□ -1.19
RNU6-278P-201ENST00000390945 BARGINQ6ZT62 677 aa7.6□□□□□ -1.19
RNU6-278P-201ENST00000390945 POTEJP0CG39 1038 aa7.59□□□□□ -1.19
RNU6-278P-201ENST00000390945 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
RNU6-278P-201ENST00000390945 RBM26Q5T8P6 1007 aaKnown RBP7.59□□□□□ -1.19
RNU6-278P-201ENST00000390945 KDM4FA0A1W2PPD8 638 aa7.57□□□□□ -1.2
RNU6-278P-201ENST00000390945 OSBPP22059 807 aa7.57□□□□□ -1.2
RNU6-278P-201ENST00000390945 POTEB2H3BUK9 544 aa7.56□□□□□ -1.2
RNU6-278P-201ENST00000390945 GPR37O15354 613 aa7.55□□□□□ -1.2
RNU6-278P-201ENST00000390945 TBC1D12O60347 775 aa7.55□□□□□ -1.2
RNU6-278P-201ENST00000390945 C3orf67Q6ZVT6 689 aa7.54□□□□□ -1.2
RNU6-278P-201ENST00000390945 UPF1Q92900 1129 aaKnown RBP eCLIP7.54□□□□□ -1.2
RNU6-278P-201ENST00000390945 SLC24A3Q9HC58 644 aa7.54□□□□□ -1.2
RNU6-278P-201ENST00000390945 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.54□□□□□ -1.2
RNU6-278P-201ENST00000390945 EVI5O60447 810 aa7.53□□□□□ -1.2
RNU6-278P-201ENST00000390945 PRIM1P49642 420 aaKnown RBP7.51□□□□□ -1.21
RNU6-278P-201ENST00000390945 BRPF1P55201 1214 aaPredicted RBP7.51□□□□□ -1.21
RNU6-278P-201ENST00000390945 GRXCR2A6NFK2 248 aa7.5□□□□□ -1.21
RNU6-278P-201ENST00000390945 GPIHBP1Q8IV16 184 aa7.5□□□□□ -1.21
RNU6-278P-201ENST00000390945 HOXB3P14651 431 aaPredicted RBP7.48□□□□□ -1.21
RNU6-278P-201ENST00000390945 TMEM132AQ24JP5 1023 aa7.48□□□□□ -1.21
RNU6-278P-201ENST00000390945 AK7Q96M32 723 aa7.48□□□□□ -1.21
RNU6-278P-201ENST00000390945 PCDHGA4Q9Y5G9 962 aa7.48□□□□□ -1.21
RNU6-278P-201ENST00000390945 DDX12PQ92771 950 aa7.47□□□□□ -1.21
RNU6-278P-201ENST00000390945 PHF14O94880 888 aa7.46□□□□□ -1.22
RNU6-278P-201ENST00000390945 NPDC1Q9NQX5 325 aaPredicted RBP7.46□□□□□ -1.22
RNU6-278P-201ENST00000390945 EPAS1Q99814 870 aa7.45□□□□□ -1.22
RNU6-278P-201ENST00000390945 MINK1Q8N4C8 1332 aaPredicted RBP7.45□□□□□ -1.22
RNU6-278P-201ENST00000390945 TRIM66O15016 1216 aa7.44□□□□□ -1.22
RNU6-278P-201ENST00000390945 GPR153Q6NV75 609 aa7.44□□□□□ -1.22
RNU6-278P-201ENST00000390945 PCDHGA10Q9Y5H3 936 aa7.44□□□□□ -1.22
RNU6-278P-201ENST00000390945 IRF6O14896 467 aa7.43□□□□□ -1.22
RNU6-278P-201ENST00000390945 PTGDRQ13258 359 aa7.43□□□□□ -1.22
RNU6-278P-201ENST00000390945 NUTM2FA1L443 756 aa7.42□□□□□ -1.22
RNU6-278P-201ENST00000390945 GNPATO15228 680 aa7.42□□□□□ -1.22
RNU6-278P-201ENST00000390945 FECHP22830 423 aa7.42□□□□□ -1.22
RNU6-278P-201ENST00000390945 HIC1Q14526 733 aa7.42□□□□□ -1.22
RNU6-278P-201ENST00000390945 KRI1Q8N9T8 703 aaKnown RBP7.42□□□□□ -1.22
RNU6-278P-201ENST00000390945 ZSWIM6Q9HCJ5 1215 aa7.42□□□□□ -1.22
RNU6-278P-201ENST00000390945 FCHSD2O94868 740 aa7.41□□□□□ -1.22
RNU6-278P-201ENST00000390945 FOSBP53539 338 aa7.41□□□□□ -1.22
RNU6-278P-201ENST00000390945 EN1Q05925 392 aaPredicted RBP7.41□□□□□ -1.22
RNU6-278P-201ENST00000390945 MAMSTRQ6ZN01 415 aa7.41□□□□□ -1.22
RNU6-278P-201ENST00000390945 SLAIN1Q8ND83 568 aa7.41□□□□□ -1.22
RNU6-278P-201ENST00000390945 MAP2K5Q13163 448 aa7.4□□□□□ -1.22
RNU6-278P-201ENST00000390945 NEUROD2Q15784 382 aa7.39□□□□□ -1.23
RNU6-278P-201ENST00000390945 DOK7Q18PE1 504 aa7.39□□□□□ -1.23
RNU6-278P-201ENST00000390945 PDE4DQ08499 809 aa7.38□□□□□ -1.23
RNU6-278P-201ENST00000390945 ARSIQ5FYB1 569 aa7.38□□□□□ -1.23
RNU6-278P-201ENST00000390945 TYW1BQ6NUM6 668 aa7.38□□□□□ -1.23
RNU6-278P-201ENST00000390945 JPH4Q96JJ6 628 aa7.38□□□□□ -1.23
RNU6-278P-201ENST00000390945 ZNF316A6NFI3 1004 aaPredicted RBP7.37□□□□□ -1.23
RNU6-278P-201ENST00000390945 KHSRPQ92945 711 aaKnown RBP eCLIP7.37□□□□□ -1.23
RNU6-278P-201ENST00000390945 FBXW7Q969H0 707 aa7.37□□□□□ -1.23
RNU6-278P-201ENST00000390945 SCUBE2Q9NQ36 999 aa7.37□□□□□ -1.23
RNU6-278P-201ENST00000390945 AMHR2Q16671 573 aa7.36□□□□□ -1.23
RNU6-278P-201ENST00000390945 GTF3C3Q9Y5Q9 886 aa7.36□□□□□ -1.23
RNU6-278P-201ENST00000390945 NUDT7P0C024 238 aa7.35□□□□□ -1.23
RNU6-278P-201ENST00000390945 C6orf132Q5T0Z8 1188 aa7.35□□□□□ -1.23
RNU6-278P-201ENST00000390945 TTC13Q8NBP0 860 aa7.35□□□□□ -1.23
RNU6-278P-201ENST00000390945 CCDC102AQ96A19 550 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms