RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CHD1LQ86WJ1 897 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 TMEM199Q8N511 208 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 PPP1R13LQ8WUF5 828 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 CLEC4DQ8WXI8 215 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 COL25A1Q9BXS0 654 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-213ENST00000641272 TRPV6Q9H1D0 765 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 HIPK3Q9H422 1215 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 RWDD1Q9H446 243 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-213ENST00000641272 DIAPH3Q9NSV4 1193 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 B4GALT4O60513 344 aa19.62■□□□□ 0.73
PHGDH-213ENST00000641272 CCL23P55773 120 aa19.62■□□□□ 0.73
PHGDH-213ENST00000641272 IQSEC1Q6DN90 963 aa19.62■□□□□ 0.73
PHGDH-213ENST00000641272 PSRC1Q6PGN9 363 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-213ENST00000641272 RNF207Q6ZRF8 634 aa19.62■□□□□ 0.73
PHGDH-213ENST00000641272 SLC43A3Q8NBI5 491 aa19.62■□□□□ 0.73
PHGDH-213ENST00000641272 MORC4Q8TE76 937 aa19.62■□□□□ 0.73
PHGDH-213ENST00000641272 ESR2Q92731 530 aa19.62■□□□□ 0.73
PHGDH-213ENST00000641272 TIFAQ96CG3 184 aa19.62■□□□□ 0.73
PHGDH-213ENST00000641272 UBA5Q9GZZ9 404 aa19.62■□□□□ 0.73
PHGDH-213ENST00000641272 RNF41Q9H4P4 317 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-213ENST00000641272 ADD3Q9UEY8 706 aaKnown RBP19.62■□□□□ 0.73
PHGDH-213ENST00000641272 TMEM265A0A087WTH1 108 aa19.61■□□□□ 0.73
PHGDH-213ENST00000641272 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-213ENST00000641272 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.61■□□□□ 0.73
PHGDH-213ENST00000641272 ZEB2O60315 1214 aa19.61■□□□□ 0.73
PHGDH-213ENST00000641272 KDM4AO75164 1064 aa19.61■□□□□ 0.73
PHGDH-213ENST00000641272 CABYRO75952 493 aa19.61■□□□□ 0.73
PHGDH-213ENST00000641272 MFAP1P55081 439 aaKnown RBP19.61■□□□□ 0.73
PHGDH-213ENST00000641272 GRIN2CQ14957 1233 aa19.61■□□□□ 0.73
PHGDH-213ENST00000641272 OR6J1Q8NGC5 347 aa19.61■□□□□ 0.73
PHGDH-213ENST00000641272 WDR11Q9BZH6 1224 aa19.61■□□□□ 0.73
PHGDH-213ENST00000641272 SCN5AQ14524 2016 aa19.61■□□□□ 0.73
PHGDH-213ENST00000641272 TANC1Q9C0D5 1861 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 A0A0C4DFX4 3053 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 B4E1Z4 1266 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 ZNF213O14771 459 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 MYL3P08590 195 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 SNHG28P0DPA3 235 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 RPS6P62753 249 aaKnown RBP19.6■□□□□ 0.73
PHGDH-213ENST00000641272 NUCB1Q02818 461 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 PDE4DQ08499 809 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 DUSP28Q4G0W2 176 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 COPS5Q92905 334 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 PBX4Q9BYU1 374 aa19.6■□□□□ 0.73
PHGDH-213ENST00000641272 CXXC1Q9P0U4 656 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-213ENST00000641272 WDR19Q8NEZ3 1342 aa19.59■□□□□ 0.73
PHGDH-213ENST00000641272 PPP2R5BQ15173 497 aa19.59■□□□□ 0.73
PHGDH-213ENST00000641272 CDC37Q16543 378 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-213ENST00000641272 PNMA1Q8ND90 353 aa19.59■□□□□ 0.73
PHGDH-213ENST00000641272 SCLYQ96I15 445 aa19.59■□□□□ 0.73
PHGDH-213ENST00000641272 NOC4LQ9BVI4 516 aaKnown RBP19.59■□□□□ 0.73
PHGDH-213ENST00000641272 WNT8AQ9H1J5 351 aa19.59■□□□□ 0.73
PHGDH-213ENST00000641272 IL23AQ9NPF7 189 aa19.59■□□□□ 0.73
PHGDH-213ENST00000641272 TRMT13Q9NUP7 481 aaKnown RBP19.59■□□□□ 0.73
PHGDH-213ENST00000641272 SCN10AQ9Y5Y9 1956 aa19.58■□□□□ 0.73
PHGDH-213ENST00000641272 PCP11498 1178 aaKnown RBP19.58■□□□□ 0.72
PHGDH-213ENST00000641272 RASIP1Q5U651 963 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 OTOP2Q7RTS6 562 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 TICAM2Q86XR7 235 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 USP38Q8NB14 1042 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 TTC14Q96N46 770 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 IL25Q9H293 177 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 OSBPL3Q9H4L5 887 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 ZNF576Q9H609 170 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 KAT14Q9H8E8 782 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 Q9Y3F1 56 aa19.58■□□□□ 0.72
PHGDH-213ENST00000641272 TNKSO95271 1327 aa19.57■□□□□ 0.72
PHGDH-213ENST00000641272 CYP2C9P11712 490 aa19.57■□□□□ 0.72
PHGDH-213ENST00000641272 PURAQ00577 322 aaKnown RBP19.57■□□□□ 0.72
PHGDH-213ENST00000641272 FAM47CQ5HY64 1035 aa19.57■□□□□ 0.72
PHGDH-213ENST00000641272 GPATCH4Q5T3I0 446 aaKnown RBP19.57■□□□□ 0.72
PHGDH-213ENST00000641272 IQCA1Q86XH1 822 aa19.57■□□□□ 0.72
PHGDH-213ENST00000641272 ALDH8A1Q9H2A2 487 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-213ENST00000641272 DHX16O60231 1041 aaKnown RBP19.56■□□□□ 0.72
PHGDH-213ENST00000641272 EDNRBP24530 442 aa19.56■□□□□ 0.72
PHGDH-213ENST00000641272 CPT1AP50416 773 aa19.56■□□□□ 0.72
PHGDH-213ENST00000641272 CHMP4BP1P59074 171 aa19.56■□□□□ 0.72
PHGDH-213ENST00000641272 AAMPQ13685 434 aa19.56■□□□□ 0.72
PHGDH-213ENST00000641272 NKX2-4Q9H2Z4 354 aa19.56■□□□□ 0.72
PHGDH-213ENST00000641272 POLR3EQ9NVU0 708 aa19.56■□□□□ 0.72
PHGDH-213ENST00000641272 KIAA1217Q5T5P2 1943 aa19.55■□□□□ 0.72
PHGDH-213ENST00000641272 RBM47A0AV96 593 aaKnown RBP19.55■□□□□ 0.72
PHGDH-213ENST00000641272 ARIH2O95376 493 aa19.55■□□□□ 0.72
PHGDH-213ENST00000641272 DGKHQ86XP1 1220 aa19.55■□□□□ 0.72
PHGDH-213ENST00000641272 ENAHQ8N8S7 591 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-213ENST00000641272 HERVK_113Q902F9 699 aa19.55■□□□□ 0.72
PHGDH-213ENST00000641272 TBC1D5Q92609 795 aa19.55■□□□□ 0.72
PHGDH-213ENST00000641272 ZSCAN10Q96SZ4 725 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-213ENST00000641272 PRDM12Q9H4Q4 367 aa19.55■□□□□ 0.72
PHGDH-213ENST00000641272 PRUNE2Q8WUY3 3088 aa19.55■□□□□ 0.72
PHGDH-213ENST00000641272 RAD50Q92878 1312 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 LOC102724159A0A0B4J2E5 919 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 ZBBXA8MT70 800 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 FGBP02675 491 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 TXNP10599 105 aaKnown RBP19.54■□□□□ 0.72
PHGDH-213ENST00000641272 PWP2Q15269 919 aaKnown RBP19.54■□□□□ 0.72
PHGDH-213ENST00000641272 IMMTQ16891 758 aaKnown RBP19.54■□□□□ 0.72
PHGDH-213ENST00000641272 QRICH1Q2TAL8 776 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms