RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CLTBP09497 229 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 C6orf222P0C671 652 aaPredicted RBP9.2□□□□□ -0.94
PNKP-229ENST00000637897 ANP32AP39687 249 aaKnown RBP9.2□□□□□ -0.94
PNKP-229ENST00000637897 TNFAIP2Q03169 654 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 PPP4R3BQ5MIZ7 849 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 FAM126BQ8IXS8 530 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 ADGRF4Q8IZF3 695 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 PPP1R13LQ8WUF5 828 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 ESR2Q92731 530 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 COPS5Q92905 334 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 TOX2Q96NM4 488 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 GUCD1Q96NT3 240 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 RNF41Q9H4P4 317 aaPredicted RBP9.2□□□□□ -0.94
PNKP-229ENST00000637897 PRDM5Q9NQX1 630 aaPredicted RBP9.2□□□□□ -0.94
PNKP-229ENST00000637897 MAD2L2Q9UI95 211 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 UMODL1Q5DID0 1318 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 WDR19Q8NEZ3 1342 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 SCN10AQ9Y5Y9 1956 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 PALM3A6NDB9 673 aaPredicted RBP9.19□□□□□ -0.94
PNKP-229ENST00000637897 MOXD2PA6NHM9 499 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 HIP1O00291 1037 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 DYNC1LI2O43237 492 aaPredicted RBP9.19□□□□□ -0.94
PNKP-229ENST00000637897 CDC37Q16543 378 aaPredicted RBP9.19□□□□□ -0.94
PNKP-229ENST00000637897 QRICH1Q2TAL8 776 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 FAM109BQ6ICB4 259 aaPredicted RBP9.19□□□□□ -0.94
PNKP-229ENST00000637897 GPR153Q6NV75 609 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 CXCL17Q6UXB2 119 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 CHST3Q7LGC8 479 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 TLK2Q86UE8 772 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 MB21D2Q8IYB1 491 aaPredicted RBP9.19□□□□□ -0.94
PNKP-229ENST00000637897 MAP4K1Q92918 833 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 TAAR1Q96RJ0 339 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 LSG1Q9H089 658 aaKnown RBP9.19□□□□□ -0.94
PNKP-229ENST00000637897 TTYH1Q9H313 450 aaPredicted RBP9.19□□□□□ -0.94
PNKP-229ENST00000637897 STARD7Q9NQZ5 370 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 CTDP1Q9Y5B0 961 aaPredicted RBP9.19□□□□□ -0.94
PNKP-229ENST00000637897 ELP1O95163 1332 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 CUL9Q8IWT3 2517 aa9.19□□□□□ -0.94
PNKP-229ENST00000637897 ASB14A6NK59 587 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 ARVCFO00192 962 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 CALML3P27482 149 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 MFAP1P55081 439 aaKnown RBP9.18□□□□□ -0.94
PNKP-229ENST00000637897 PSMC6P62333 389 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 GHRHRQ02643 423 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 TROAPQ12815 778 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 IMMTQ16891 758 aaKnown RBP9.18□□□□□ -0.94
PNKP-229ENST00000637897 USH1GQ495M9 461 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 DUSP28Q4G0W2 176 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 GNASQ5JWF2 1037 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 RASIP1Q5U651 963 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 IQSEC1Q6DN90 963 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 CCDC62Q6P9F0 684 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 RNF207Q6ZRF8 634 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 DEFB123Q8N688 67 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 SYTL5Q8TDW5 730 aaPredicted RBP9.18□□□□□ -0.94
PNKP-229ENST00000637897 IGDCC4Q8TDY8 1250 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 RAD50Q92878 1312 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 CTAGE1Q96RT6 745 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 VTA1Q9NP79 307 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 VCANP13611 3396 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 PRUNE2Q8WUY3 3088 aa9.18□□□□□ -0.94
PNKP-229ENST00000637897 UNC80Q8N2C7 3258 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 PTPDC1A2A3K4 754 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 E7EWF7 191 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 RGS20O76081 388 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 TIMP1P01033 207 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 FSCN1Q16658 493 aaKnown RBP9.17□□□□□ -0.94
PNKP-229ENST00000637897 GPATCH4Q5T3I0 446 aaKnown RBP9.17□□□□□ -0.94
PNKP-229ENST00000637897 KIAA1211Q6ZU35 1233 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 RGS22Q8NE09 1264 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.17□□□□□ -0.94
PNKP-229ENST00000637897 TRPV6Q9H1D0 765 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 WNT8AQ9H1J5 351 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 VAT1LQ9HCJ6 419 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 TMEM39AQ9NV64 488 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 Q9Y3F1 56 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 MYH6P13533 1939 aa9.17□□□□□ -0.94
PNKP-229ENST00000637897 SPTBN5Q9NRC6 3674 aaKnown RBP9.17□□□□□ -0.94
PNKP-229ENST00000637897 TET1Q8NFU7 2136 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 A0A0U1RQG5 324 aaPredicted RBP9.16□□□□□ -0.94
PNKP-229ENST00000637897 B4GALT4O60513 344 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 CSF2RAP15509 400 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 PURAQ00577 322 aaKnown RBP9.16□□□□□ -0.94
PNKP-229ENST00000637897 GRM4Q14833 912 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 ASPRV1Q53RT3 343 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 TMEM240Q5SV17 173 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 IQCA1Q86XH1 822 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 PCSK9Q8NBP7 692 aaKnown RBP9.16□□□□□ -0.94
PNKP-229ENST00000637897 IL31RAQ8NI17 732 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 NUP133Q8WUM0 1156 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 GLT1D1Q96MS3 346 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 LBHD1Q9BQE6 289 aaPredicted RBP9.16□□□□□ -0.94
PNKP-229ENST00000637897 WDR11Q9BZH6 1224 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 KRT23Q9C075 422 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 BCAS3Q9H6U6 928 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 RIOX1Q9H6W3 641 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 KAT14Q9H8E8 782 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 CTNNA3Q9UI47 895 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 TELO2Q9Y4R8 837 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 RBM8AQ9Y5S9 174 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms