RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CRKP46108 304 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 APOBRQ0VD83 1088 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 GLB1LQ6UWU2 654 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 KIAA0825Q8IV33 1275 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 ADAMTS17Q8TE56 1095 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 TSPAN17Q96FV3 270 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 CNNM2Q9H8M5 875 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 SPATA6Q9NWH7 488 aaPredicted RBP5.58□□□□□ -1.52
VBP1-204ENST00000625964 FBXL21Q9UKT6 434 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 PLA2G2DQ9UNK4 145 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 MC3RP41968 323 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 RBM25P49756 843 aaKnown RBP5.58□□□□□ -1.52
VBP1-204ENST00000625964 SEZ6Q53EL9 994 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 C9orf131Q5VYM1 1079 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 BORAQ6PGQ7 559 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 FAM124AQ86V42 546 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 SRRTQ9BXP5 876 aaKnown RBP5.58□□□□□ -1.52
VBP1-204ENST00000625964 LRRC3Q9BY71 257 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 PCED1AQ9H1Q7 454 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 BRMS1Q9HCU9 246 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 SMARCA5O60264 1052 aaPredicted RBP5.57□□□□□ -1.52
VBP1-204ENST00000625964 GSTM1P09488 218 aa5.57□□□□□ -1.52
VBP1-204ENST00000625964 HDLBPQ00341 1268 aaKnown RBP5.57□□□□□ -1.52
VBP1-204ENST00000625964 CRTC3Q6UUV7 619 aa5.57□□□□□ -1.52
VBP1-204ENST00000625964 MKRN2Q9H000 416 aaKnown RBP5.57□□□□□ -1.52
VBP1-204ENST00000625964 PCDH18Q9HCL0 1135 aa5.57□□□□□ -1.52
VBP1-204ENST00000625964 MCM4P33991 863 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 SLC9A5Q14940 896 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 SURF1Q15526 300 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 FAM26FQ5R3K3 315 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 CWF19L1Q69YN2 538 aaKnown RBP5.56□□□□□ -1.52
VBP1-204ENST00000625964 METTL16Q86W50 562 aaKnown RBP5.56□□□□□ -1.52
VBP1-204ENST00000625964 NT5DC4Q86YG4 428 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 ZNF747Q9BV97 191 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 SLC12A9Q9BXP2 914 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 VPS11Q9H270 941 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 DDX41Q9UJV9 622 aaKnown RBP5.56□□□□□ -1.52
VBP1-204ENST00000625964 INVSQ9Y283 1065 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 PCDHB14Q9Y5E9 798 aa5.56□□□□□ -1.52
VBP1-204ENST00000625964 PMLP29590 882 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 NOP2P46087 812 aaKnown RBP5.55□□□□□ -1.52
VBP1-204ENST00000625964 RGS19P49795 217 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 RACK1P63244 317 aaKnown RBP5.55□□□□□ -1.52
VBP1-204ENST00000625964 CACNB2Q08289 660 aaPredicted RBP5.55□□□□□ -1.52
VBP1-204ENST00000625964 AUHQ13825 339 aaKnown RBP5.55□□□□□ -1.52
VBP1-204ENST00000625964 CDSNQ15517 529 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 RGL3Q3MIN7 710 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 OVOS1Q6IE37 1185 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 ZNF654Q8IZM8 581 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 LINC00482Q8N8I6 264 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 SMARCC2Q8TAQ2 1214 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 NKD1Q969G9 470 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 ZNF512BQ96KM6 892 aaPredicted RBP5.55□□□□□ -1.52
VBP1-204ENST00000625964 DSCC1Q9BVC3 393 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 NT5C1AQ9BXI3 368 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 ST6GALNAC2Q9UJ37 374 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 ZNF536O15090 1300 aa5.55□□□□□ -1.52
VBP1-204ENST00000625964 FGF10O15520 208 aaPredicted RBP5.54□□□□□ -1.52
VBP1-204ENST00000625964 POLR2BP30876 1174 aaKnown RBP5.54□□□□□ -1.52
VBP1-204ENST00000625964 GK5Q6ZS86 529 aa5.54□□□□□ -1.52
VBP1-204ENST00000625964 NLRC3Q7RTR2 1065 aa5.54□□□□□ -1.52
VBP1-204ENST00000625964 CABP7Q86V35 215 aa5.54□□□□□ -1.52
VBP1-204ENST00000625964 ZBTB8AQ96BR9 441 aa5.54□□□□□ -1.52
VBP1-204ENST00000625964 ATG4CQ96DT6 458 aa5.54□□□□□ -1.52
VBP1-204ENST00000625964 NOX5Q96PH1 765 aa5.54□□□□□ -1.52
VBP1-204ENST00000625964 MROH6A6NGR9 719 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 ZBTB7AO95365 584 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 GLI4P10075 376 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 ZNF165P49910 485 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 EHMT1Q9H9B1 1298 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 NUDT5Q9UKK9 219 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 TBC1D8O95759 1140 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 RPL13P26373 211 aaKnown RBP5.53□□□□□ -1.52
VBP1-204ENST00000625964 L1CAMP32004 1257 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 RBM10P98175 930 aaKnown RBP5.53□□□□□ -1.52
VBP1-204ENST00000625964 PURAQ00577 322 aaKnown RBP5.53□□□□□ -1.52
VBP1-204ENST00000625964 CLCQ05315 142 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 SLITRK4Q8IW52 837 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 C7orf61Q8IZ16 206 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 PEX11GQ96HA9 241 aa5.53□□□□□ -1.52
VBP1-204ENST00000625964 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.53□□□□□ -1.52
VBP1-204ENST00000625964 PAK2Q13177 524 aa5.52□□□□□ -1.53
VBP1-204ENST00000625964 TMEM192Q8IY95 271 aa5.52□□□□□ -1.53
VBP1-204ENST00000625964 REXO1Q8N1G1 1221 aaKnown RBP5.52□□□□□ -1.53
VBP1-204ENST00000625964 NETO2Q8NC67 525 aa5.52□□□□□ -1.53
VBP1-204ENST00000625964 KLC2Q9H0B6 622 aa5.52□□□□□ -1.53
VBP1-204ENST00000625964 CCSER2Q9H7U1 834 aa5.52□□□□□ -1.53
VBP1-204ENST00000625964 TCF3P15923 654 aa5.51□□□□□ -1.53
VBP1-204ENST00000625964 TACR1P25103 407 aa5.51□□□□□ -1.53
VBP1-204ENST00000625964 LRRFIP1Q32MZ4 808 aaKnown RBP5.51□□□□□ -1.53
VBP1-204ENST00000625964 LIMS2Q7Z4I7 341 aa5.51□□□□□ -1.53
VBP1-204ENST00000625964 PLEKHH3Q7Z736 793 aa5.51□□□□□ -1.53
VBP1-204ENST00000625964 TNFRSF10CO14798 259 aa5.5□□□□□ -1.53
VBP1-204ENST00000625964 NME1P15531 152 aaKnown RBP5.5□□□□□ -1.53
VBP1-204ENST00000625964 FBXW10Q5XX13 1052 aa5.5□□□□□ -1.53
VBP1-204ENST00000625964 GPRASP2Q96D09 838 aa5.5□□□□□ -1.53
VBP1-204ENST00000625964 DHRS1Q96LJ7 313 aa5.5□□□□□ -1.53
VBP1-204ENST00000625964 SLC6A18Q96N87 628 aa5.5□□□□□ -1.53
VBP1-204ENST00000625964 PTCHD1Q96NR3 888 aa5.5□□□□□ -1.53
VBP1-204ENST00000625964 FERD3LQ96RJ6 166 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms