RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 BEGAINQ9BUH8 593 aa25.38■■□□□ 1.65
ATG4D-209ENST00000588857 PCDHA7Q9UN72 937 aa25.38■■□□□ 1.65
ATG4D-209ENST00000588857 MEIS2O14770 477 aa25.37■■□□□ 1.65
ATG4D-209ENST00000588857 MARCKSP29966 332 aaPredicted RBP25.37■■□□□ 1.65
ATG4D-209ENST00000588857 GJA5P36382 358 aa25.37■■□□□ 1.65
ATG4D-209ENST00000588857 AP3B2Q13367 1082 aa25.37■■□□□ 1.65
ATG4D-209ENST00000588857 TBCKQ8TEA7 893 aa25.37■■□□□ 1.65
ATG4D-209ENST00000588857 AGTPBP1Q9UPW5 1226 aa25.37■■□□□ 1.65
ATG4D-209ENST00000588857 PIK3CDO00329 1044 aa25.36■■□□□ 1.65
ATG4D-209ENST00000588857 OPLAHO14841 1288 aa25.36■■□□□ 1.65
ATG4D-209ENST00000588857 MCM7P33993 719 aa25.36■■□□□ 1.65
ATG4D-209ENST00000588857 CTCFP49711 727 aaPredicted RBP25.36■■□□□ 1.65
ATG4D-209ENST00000588857 OAZ1P54368 228 aa25.36■■□□□ 1.65
ATG4D-209ENST00000588857 IRX3P78415 501 aaPredicted RBP25.36■■□□□ 1.65
ATG4D-209ENST00000588857 PABPC4Q13310 644 aaKnown RBP eCLIP25.36■■□□□ 1.65
ATG4D-209ENST00000588857 THSD7BQ9C0I4 1608 aa25.36■■□□□ 1.65
ATG4D-209ENST00000588857 RBBP6Q7Z6E9 1792 aaKnown RBP25.36■■□□□ 1.65
ATG4D-209ENST00000588857 SPDYE16A6NNV3 312 aaPredicted RBP25.35■■□□□ 1.65
ATG4D-209ENST00000588857 WNT7AO00755 349 aa25.35■■□□□ 1.65
ATG4D-209ENST00000588857 FOSP01100 380 aaPredicted RBP25.35■■□□□ 1.65
ATG4D-209ENST00000588857 ALAS1P13196 640 aa25.35■■□□□ 1.65
ATG4D-209ENST00000588857 ADALQ6DHV7 355 aa25.35■■□□□ 1.65
ATG4D-209ENST00000588857 SPDYE3A6NKU9 549 aa25.35■■□□□ 1.65
ATG4D-209ENST00000588857 GCOM1H8Y6P7 765 aaPredicted RBP25.35■■□□□ 1.65
ATG4D-209ENST00000588857 CFBP00751 764 aa25.35■■□□□ 1.65
ATG4D-209ENST00000588857 POLR2MP0CAP2 368 aa25.35■■□□□ 1.65
ATG4D-209ENST00000588857 LETM2Q2VYF4 491 aa25.35■■□□□ 1.65
ATG4D-209ENST00000588857 KRI1Q8N9T8 703 aaKnown RBP25.35■■□□□ 1.65
ATG4D-209ENST00000588857 CETPP11597 493 aa25.34■■□□□ 1.65
ATG4D-209ENST00000588857 HOXA13P31271 388 aaPredicted RBP25.34■■□□□ 1.65
ATG4D-209ENST00000588857 GTF2A2P52657 109 aa25.34■■□□□ 1.65
ATG4D-209ENST00000588857 PTGDRQ13258 359 aa25.34■■□□□ 1.65
ATG4D-209ENST00000588857 MCF2L2Q86YR7 1114 aa25.34■■□□□ 1.65
ATG4D-209ENST00000588857 REPS2Q8NFH8 660 aa25.34■■□□□ 1.65
ATG4D-209ENST00000588857 ANP32EQ9BTT0 268 aa25.34■■□□□ 1.65
ATG4D-209ENST00000588857 ANO3Q9BYT9 981 aa25.34■■□□□ 1.65
ATG4D-209ENST00000588857 MORC2Q9Y6X9 1032 aaPredicted RBP25.34■■□□□ 1.65
ATG4D-209ENST00000588857 CCNT1O60563 726 aaKnown RBP25.33■■□□□ 1.65
ATG4D-209ENST00000588857 OSBPP22059 807 aa25.33■■□□□ 1.65
ATG4D-209ENST00000588857 MOGSQ13724 837 aa25.33■■□□□ 1.65
ATG4D-209ENST00000588857 HOMER2Q9NSB8 354 aa25.33■■□□□ 1.65
ATG4D-209ENST00000588857 A0A1W2PQ27 194 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 A0A1W2PQ64 194 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 A0A1W2PQD8 194 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 ATP2A1O14983 1001 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 CUTAO60888 179 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 ZBTB48P10074 688 aaPredicted RBP25.32■■□□□ 1.64
ATG4D-209ENST00000588857 TMEM132BQ14DG7 1078 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 SNRNP48Q6IEG0 339 aaKnown RBP25.32■■□□□ 1.64
ATG4D-209ENST00000588857 CCAR1Q8IX12 1150 aaKnown RBP25.32■■□□□ 1.64
ATG4D-209ENST00000588857 MB21D1Q8N884 522 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 TRERF1Q96PN7 1200 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 TEX13BQ9BXU2 312 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 ASCC2Q9H1I8 757 aaPredicted RBP25.32■■□□□ 1.64
ATG4D-209ENST00000588857 ZNF214Q9UL59 606 aaPredicted RBP25.32■■□□□ 1.64
ATG4D-209ENST00000588857 A0A0G2JMZ2 1700 aa25.32■■□□□ 1.64
ATG4D-209ENST00000588857 CA12O43570 354 aa25.31■■□□□ 1.64
ATG4D-209ENST00000588857 ATP2C1P98194 919 aaPredicted RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 MKRN3Q13064 507 aaKnown RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 ORC2Q13416 577 aaPredicted RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 COL13A1Q5TAT6 717 aaPredicted RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 SPRYD7Q5W111 196 aa25.31■■□□□ 1.64
ATG4D-209ENST00000588857 CAVIN1Q6NZI2 390 aaKnown RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 REM2Q8IYK8 340 aaPredicted RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 CLEC4DQ8WXI8 215 aa25.31■■□□□ 1.64
ATG4D-209ENST00000588857 P2RX7Q99572 595 aaKnown RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 NAP1L4Q99733 375 aaKnown RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 HSPA8P11142 646 aaKnown RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 PLS1Q14651 629 aa25.31■■□□□ 1.64
ATG4D-209ENST00000588857 AXDND1Q5T1B0 1012 aaPredicted RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 GPAT2Q6NUI2 795 aa25.31■■□□□ 1.64
ATG4D-209ENST00000588857 FCHSD1Q86WN1 690 aa25.31■■□□□ 1.64
ATG4D-209ENST00000588857 SAMD3Q8N6K7 520 aa25.31■■□□□ 1.64
ATG4D-209ENST00000588857 TBC1D5Q92609 795 aa25.31■■□□□ 1.64
ATG4D-209ENST00000588857 SYAP1Q96A49 352 aaPredicted RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 FERMT2Q96AC1 680 aa25.31■■□□□ 1.64
ATG4D-209ENST00000588857 FBXO2Q9UK22 296 aaPredicted RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 SRPRBQ9Y5M8 271 aaKnown RBP25.31■■□□□ 1.64
ATG4D-209ENST00000588857 PTPREP23469 700 aa25.3■■□□□ 1.64
ATG4D-209ENST00000588857 STAT3P40763 770 aa25.3■■□□□ 1.64
ATG4D-209ENST00000588857 LBX1P52954 281 aa25.3■■□□□ 1.64
ATG4D-209ENST00000588857 TKFCQ3LXA3 575 aa25.3■■□□□ 1.64
ATG4D-209ENST00000588857 CCDC73Q6ZRK6 1079 aa25.3■■□□□ 1.64
ATG4D-209ENST00000588857 FSIP1Q8NA03 581 aa25.3■■□□□ 1.64
ATG4D-209ENST00000588857 MRPS27Q92552 414 aaKnown RBP25.3■■□□□ 1.64
ATG4D-209ENST00000588857 EHMT1Q9H9B1 1298 aa25.3■■□□□ 1.64
ATG4D-209ENST00000588857 PRDM10Q9NQV6 1147 aa25.3■■□□□ 1.64
ATG4D-209ENST00000588857 RNF146Q9NTX7 359 aa25.3■■□□□ 1.64
ATG4D-209ENST00000588857 MAP3K20Q9NYL2 800 aaKnown RBP25.3■■□□□ 1.64
ATG4D-209ENST00000588857 CCL15-CCL14A0A0B4J2E2 113 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 LAD1O00515 517 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 NFIBO00712 420 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 CMA1P23946 247 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 USP11P51784 963 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 HERVK_113P62684 666 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 CCL15Q16663 113 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 MUM1L1Q5H9M0 696 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 LBX2Q6XYB7 198 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 MS4A4AQ96JQ5 239 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 GZF1Q9H116 711 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms