RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 TMEM132BQ14DG7 1078 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 CCL15Q16663 113 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 KLHL40Q2TBA0 621 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 SNRNP48Q6IEG0 339 aaKnown RBP16.68■□□□□ 0.26
SENP3-208ENST00000583277 GPAT2Q6NUI2 795 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 SAPCD2Q86UD0 394 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 ANO3Q9BYT9 981 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 EHMT1Q9H9B1 1298 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 GADD45BO75293 160 aaPredicted RBP16.68■□□□□ 0.26
SENP3-208ENST00000583277 CFBP00751 764 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 HERVK_113P62684 666 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 CLEC4DQ8WXI8 215 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 A0A1W2PQ27 194 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 A0A1W2PQ64 194 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 A0A1W2PQD8 194 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 LAD1O00515 517 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 GCFC2P16383 781 aaKnown RBP16.67■□□□□ 0.26
SENP3-208ENST00000583277 MCM7P33993 719 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 STAT3P40763 770 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 HSD17B4P51659 736 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 ZNF157P51786 506 aaPredicted RBP16.67■□□□□ 0.26
SENP3-208ENST00000583277 ATP2C1P98194 919 aaPredicted RBP16.67■□□□□ 0.26
SENP3-208ENST00000583277 FSTL1Q12841 308 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 ZNF174Q15697 407 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 ADALQ6DHV7 355 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 ANKRD23Q86SG2 305 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 RASAL3Q86YV0 1011 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 KRI1Q8N9T8 703 aaKnown RBP16.67■□□□□ 0.26
SENP3-208ENST00000583277 PGBD1Q96JS3 809 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 TRERF1Q96PN7 1200 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 P2RX7Q99572 595 aaKnown RBP16.67■□□□□ 0.26
SENP3-208ENST00000583277 HOMER2Q9NSB8 354 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 RNF146Q9NTX7 359 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 TLL2Q9Y6L7 1015 aa16.67■□□□□ 0.26
SENP3-208ENST00000583277 MARCKSP29966 332 aaPredicted RBP16.66■□□□□ 0.26
SENP3-208ENST00000583277 HOXA13P31271 388 aaPredicted RBP16.66■□□□□ 0.26
SENP3-208ENST00000583277 COPB2P35606 906 aa16.66■□□□□ 0.26
SENP3-208ENST00000583277 SREBF1P36956 1147 aa16.66■□□□□ 0.26
SENP3-208ENST00000583277 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
SENP3-208ENST00000583277 RGMBQ6NW40 437 aa16.66■□□□□ 0.26
SENP3-208ENST00000583277 GPT2Q8TD30 523 aa16.66■□□□□ 0.26
SENP3-208ENST00000583277 BRI3BPQ8WY22 251 aa16.66■□□□□ 0.26
SENP3-208ENST00000583277 FERMT2Q96AC1 680 aa16.66■□□□□ 0.26
SENP3-208ENST00000583277 PCDHA7Q9UN72 937 aa16.66■□□□□ 0.26
SENP3-208ENST00000583277 NFIBO00712 420 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 WNT7AO00755 349 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 CCNT1O60563 726 aaKnown RBP16.65■□□□□ 0.26
SENP3-208ENST00000583277 CUTAO60888 179 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 USP11P51784 963 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 MKRN3Q13064 507 aaKnown RBP16.65■□□□□ 0.26
SENP3-208ENST00000583277 PTGDRQ13258 359 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 PLS1Q14651 629 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 ARL6IP4Q66PJ3 421 aaKnown RBP16.65■□□□□ 0.26
SENP3-208ENST00000583277 PPP4R3AQ6IN85 833 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 MOXD1Q6UVY6 613 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 CHST13Q8NET6 341 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 HHIPL1Q96JK4 782 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 ACAD9Q9H845 621 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 RABGAP1Q9Y3P9 1069 aa16.65■□□□□ 0.26
SENP3-208ENST00000583277 MANSC4A6NHS7 340 aaPredicted RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 TMEM88BA6NKF7 163 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 PDHXO00330 501 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 NEMFO60524 1076 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 PTPREP23469 700 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 ARHGAP4P98171 946 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 MUM1L1Q5H9M0 696 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 RIOX2Q8IUF8 465 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 ANP32EQ9BTT0 268 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 SPATC1LQ9H0A9 340 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 FBXO2Q9UK22 296 aaPredicted RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 SRPRBQ9Y5M8 271 aaKnown RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 BTBD19C9JJ37 291 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 SLC10A3P09131 477 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 YY1P25490 414 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 PRPHP41219 470 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 AXDND1Q5T1B0 1012 aaPredicted RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 RNF207Q6ZRF8 634 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 CCDC73Q6ZRK6 1079 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 FCHSD1Q86WN1 690 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 CRYGNQ8WXF5 182 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 MRPS27Q92552 414 aaKnown RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 CCDC102AQ96A19 550 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 SYAP1Q96A49 352 aaPredicted RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 PARK7Q99497 189 aaKnown RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 BTBD7Q9P203 1132 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 ABT1Q9ULW3 272 aaKnown RBP16.64■□□□□ 0.25
SENP3-208ENST00000583277 RIPK3Q9Y572 518 aa16.64■□□□□ 0.25
SENP3-208ENST00000583277 SLC25A27O95847 323 aa16.63■□□□□ 0.25
SENP3-208ENST00000583277 OR52Z1P0C646 297 aa16.63■□□□□ 0.25
SENP3-208ENST00000583277 CMA1P23946 247 aa16.63■□□□□ 0.25
SENP3-208ENST00000583277 SMCR8Q8TEV9 937 aaPredicted RBP16.63■□□□□ 0.25
SENP3-208ENST00000583277 TBC1D5Q92609 795 aa16.63■□□□□ 0.25
SENP3-208ENST00000583277 PAGR1Q9BTK6 254 aa16.63■□□□□ 0.25
SENP3-208ENST00000583277 CYP3A7-CYP3A51PA0A087WV96 503 aa16.62■□□□□ 0.25
SENP3-208ENST00000583277 CYP3A4P08684 503 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms