RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 KRIT1O00522 736 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 ZNF589Q86UQ0 364 aaPredicted RBP13.81□□□□□ -0.2
SPG11-203ENST00000535302 RAB3IPQ96QF0 476 aaPredicted RBP13.81□□□□□ -0.2
SPG11-203ENST00000535302 ARHGAP6O43182 974 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 KDM3AQ9Y4C1 1321 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 CLTAP09496 248 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 ATP2B4P23634 1241 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 ACRBPQ8NEB7 543 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 HOOK2Q96ED9 719 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 QTRT2Q9H974 415 aaKnown RBP13.81□□□□□ -0.2
SPG11-203ENST00000535302 KIAA1468Q9P260 1216 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 CAPN7Q9Y6W3 813 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 CTNNA1P35221 906 aaKnown RBP13.81□□□□□ -0.2
SPG11-203ENST00000535302 STAT1P42224 750 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 ADAM9Q13443 819 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 FAM178BQ8IXR5 827 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 ATP2A3Q93084 1043 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 TNNC2P02585 160 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 DYNLT1P63172 113 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 HS1BP3Q53T59 392 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 ADALQ6DHV7 355 aa13.81□□□□□ -0.2
SPG11-203ENST00000535302 ZMYND10O75800 440 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 PHEXP78562 749 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 PABPC4Q13310 644 aaKnown RBP eCLIP13.8□□□□□ -0.2
SPG11-203ENST00000535302 TMEM259Q4ZIN3 620 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 CCDC38Q502W7 563 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
SPG11-203ENST00000535302 IMPACTQ9P2X3 320 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 SUFUQ9UMX1 484 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 ZBTB1Q9Y2K1 713 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 STK24Q9Y6E0 443 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 LOC102724428A0A0B4J2F2 783 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 SIK1P57059 783 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 DYNLL2Q96FJ2 89 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 PCDHA1Q9Y5I3 950 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 PDIA3P30101 505 aaKnown RBP13.8□□□□□ -0.2
SPG11-203ENST00000535302 CDC25AP30304 524 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.8□□□□□ -0.2
SPG11-203ENST00000535302 KCTD16Q68DU8 428 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 CSRNP1Q96S65 589 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 RAD17O75943 681 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 KRT3P12035 628 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 P4HA1P13674 534 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 ZBTB8OSQ8IWT0 167 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 MRPL11Q9Y3B7 192 aaKnown RBP13.8□□□□□ -0.2
SPG11-203ENST00000535302 PDE6CP51160 858 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 OSTNP61366 133 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 PAK2Q13177 524 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 SZRD1Q7Z422 152 aa13.8□□□□□ -0.2
SPG11-203ENST00000535302 CLIC2O15247 247 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
SPG11-203ENST00000535302 GPT2Q8TD30 523 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 ATF5Q9Y2D1 282 aaPredicted RBP13.79□□□□□ -0.2
SPG11-203ENST00000535302 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
SPG11-203ENST00000535302 MAP3K15Q6ZN16 1313 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 ENC1O14682 589 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 PFKFB2O60825 505 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 IFNAR2P48551 515 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 DMP1Q13316 513 aaPredicted RBP13.79□□□□□ -0.2
SPG11-203ENST00000535302 CFAP61Q8NHU2 1237 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 FAM71BQ8TC56 605 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 AKT3Q9Y243 479 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 A0A1B0GUA9 196 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 WDR91A4D1P6 747 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 PALM3A6NDB9 673 aaPredicted RBP13.79□□□□□ -0.2
SPG11-203ENST00000535302 H7C0C1 242 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 ATP5OP48047 213 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 COA7Q96BR5 231 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 MTRQ99707 1265 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 C1orf112Q9NSG2 853 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 ATP7AQ04656 1500 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 SMAD1Q15797 465 aaKnown RBP13.79□□□□□ -0.2
SPG11-203ENST00000535302 ANO4Q32M45 955 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 LGSNQ5TDP6 509 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 CEP128Q6ZU80 1094 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 ZBTB33Q86T24 672 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 ZNF274Q96GC6 653 aaPredicted RBP13.79□□□□□ -0.2
SPG11-203ENST00000535302 SAR1BQ9Y6B6 198 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 THAP12O43422 761 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 BRD1O95696 1058 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 GNGT1P63211 74 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 DBN1Q16643 649 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 GABPB2Q8TAK5 448 aaPredicted RBP13.79□□□□□ -0.2
SPG11-203ENST00000535302 MTMR6Q9Y217 621 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 SGK1O00141 431 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 TRPA1O75762 1119 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 APOEP02649 317 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 RASSF7Q02833 373 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 FAM196AQ6ZSG2 479 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 SSH3Q8TE77 659 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 PRDM5Q9NQX1 630 aaPredicted RBP13.79□□□□□ -0.2
SPG11-203ENST00000535302 ABCC4O15439 1325 aa13.79□□□□□ -0.2
SPG11-203ENST00000535302 NVLO15381 856 aaKnown RBP13.78□□□□□ -0.2
SPG11-203ENST00000535302 CCDC93Q567U6 631 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 CERS3Q8IU89 383 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 ATP10AO60312 1499 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 TMEM191BP0C7N4 346 aa13.78□□□□□ -0.2
SPG11-203ENST00000535302 TUBB4BP68371 445 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms