RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 FBF1Q8TES7 1133 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 ZSWIM6Q9HCJ5 1215 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 GGA3Q9NZ52 723 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.46□□□□□ -0.42
PTPRK-221ENST00000532331 NEXMIFQ5QGS0 1516 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 KIDINS220Q9ULH0 1771 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 PNMA6FA0A0J9YX94 578 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 RPS12P25398 132 aaKnown RBP12.46□□□□□ -0.42
PTPRK-221ENST00000532331 TGFB2P61812 414 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 STXBP2Q15833 593 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 ANGEL2Q5VTE6 544 aaKnown RBP12.46□□□□□ -0.42
PTPRK-221ENST00000532331 C9orf131Q5VYM1 1079 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 IPO4Q8TEX9 1081 aaKnown RBP12.46□□□□□ -0.42
PTPRK-221ENST00000532331 MAP4K1Q92918 833 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 BLZF1Q9H2G9 400 aa12.46□□□□□ -0.42
PTPRK-221ENST00000532331 RAVER2Q9HCJ3 691 aaKnown RBP12.46□□□□□ -0.42
PTPRK-221ENST00000532331 RHOXF2BP0C7M4 288 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 DCUN1D2Q6PH85 259 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 CCDC25Q86WR0 208 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-221ENST00000532331 ATRIPQ8WXE1 791 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 CEP170P1Q96L14 293 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 RHOXF2Q9BQY4 288 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 PANK4Q9NVE7 773 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.45□□□□□ -0.421e-8■■■□□ 16
PTPRK-221ENST00000532331 V9GYY5 206 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-221ENST00000532331 SNAP25P60880 206 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
PTPRK-221ENST00000532331 MYSM1Q5VVJ2 828 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 MICAL1Q8TDZ2 1067 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 SELENOSQ9BQE4 189 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 NDC80O14777 642 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
PTPRK-221ENST00000532331 RASA3Q14644 834 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 APOA5Q6Q788 366 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 METTL23Q86XA0 190 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 STAMQ92783 540 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 STIM2Q9P246 746 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 UTYO14607 1347 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 USP17L15C9J2P7 530 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 USP17L13C9JLJ4 530 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 USP17L11C9JVI0 530 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 USP17L18D6R9N7 530 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 USP17L22D6RA61 530 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 USP17L17D6RBQ6 530 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 USP17L19D6RCP7 530 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 USP17L20D6RJB6 530 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 GNA14O95837 355 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 ECE1P42892 770 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 USP17L24Q0WX57 530 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 SNAPC2Q13487 334 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 SLC9C1Q4G0N8 1177 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 ZNF34Q8IZ26 560 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 MYOCDQ8IZQ8 938 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 MXRA7P84157 204 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 PDXDC2PQ6P474 469 aa12.45□□□□□ -0.42
PTPRK-221ENST00000532331 FAM84BQ96KN1 310 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-221ENST00000532331 CYP2E1P05181 493 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-221ENST00000532331 IFRD2Q12894 506 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-221ENST00000532331 ZNF589Q86UQ0 364 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-221ENST00000532331 GIMAP8Q8ND71 665 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-221ENST00000532331 TRERF1Q96PN7 1200 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 BTBD18B2RXH4 712 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 PSMD14O00487 310 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 ARFGAP2Q8N6H7 521 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 NELFBQ8WX92 580 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 RBSNQ9H1K0 784 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 CBX8Q9HC52 389 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-221ENST00000532331 TUBB2AQ13885 445 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 PGBD1Q96JS3 809 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 PARK7Q99497 189 aaKnown RBP12.44□□□□□ -0.42
PTPRK-221ENST00000532331 NAPGQ99747 312 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-221ENST00000532331 TUBB2BQ9BVA1 445 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 NFE2L3Q9Y4A8 694 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 LAD1O00515 517 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 ATP2C2O75185 946 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 STK10O94804 968 aaKnown RBP12.44□□□□□ -0.42
PTPRK-221ENST00000532331 DGKHQ86XP1 1220 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 ANKS4BQ8N8V4 417 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 POMGNT1Q8WZA1 660 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 STRBPQ96SI9 672 aaKnown RBP12.44□□□□□ -0.42
PTPRK-221ENST00000532331 ST7Q9NRC1 585 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 HESX1Q9UBX0 185 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 KIAA1024Q9UPX6 916 aa12.44□□□□□ -0.42
PTPRK-221ENST00000532331 ZBBXA8MT70 800 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-221ENST00000532331 MTERF2Q49AM1 385 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 CFAP58Q5T655 872 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 CEP128Q6ZU80 1094 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 UBL4BQ8N7F7 174 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 IMPACTQ9P2X3 320 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 TLDC2A0PJX2 215 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 ARHGEF37A1IGU5 675 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 HNRNPDLO14979 420 aaKnown RBP12.43□□□□□ -0.42
PTPRK-221ENST00000532331 CYP21A2P08686 494 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 CYP2D6P10635 497 aa12.43□□□□□ -0.42
PTPRK-221ENST00000532331 ERCC5P28715 1186 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms