RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 ZNF669Q96BR6 464 aaPredicted RBP4.92□□□□□ -1.62
CLNS1A-208ENST00000527265 SMAD5Q99717 465 aaKnown RBP4.92□□□□□ -1.62
CLNS1A-208ENST00000527265 ZNF700Q9H0M5 742 aa4.92□□□□□ -1.62
CLNS1A-208ENST00000527265 RPS6KL1Q9Y6S9 549 aa4.92□□□□□ -1.62
CLNS1A-208ENST00000527265 OTOL1A6NHN0 477 aaPredicted RBP4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 NRDCO43847 1150 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 EOMESO95936 686 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 FGAP02671 866 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 HPXP02790 462 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 ZNF165P49910 485 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 PIN1Q13526 163 aaPredicted RBP4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 INPP5AQ14642 412 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 WIPI1Q5MNZ9 446 aaPredicted RBP4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 LRFN4Q6PJG9 635 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 FAM178BQ8IXR5 827 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 RBBP8NLQ8NC74 664 aaPredicted RBP4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 RIN3Q8TB24 985 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 PLPPR2Q96GM1 343 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 PLCD4Q9BRC7 762 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 BRMS1Q9HCU9 246 aa4.91□□□□□ -1.62
CLNS1A-208ENST00000527265 TEX51A0A1B0GUA7 166 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 DCDC2CA8MYV0 355 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 ADCY3O60266 1144 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 GRIN3BO60391 1043 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 RFPL3O75679 317 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 INSRRP14616 1297 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 BDNFP23560 247 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 CLCQ05315 142 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 POU5F1BQ06416 359 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 SLC4A10Q6U841 1118 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 GK5Q6ZS86 529 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 C22orf34Q6ZV56 151 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 HDXQ7Z353 690 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 SP8Q8IXZ3 490 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 LILRA2Q8N149 483 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 PPM1EQ8WY54 764 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 UBE2FQ969M7 185 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 ELMO3Q96BJ8 720 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 NAP1L4Q99733 375 aaKnown RBP4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 TARS2Q9BW92 718 aaKnown RBP4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 SPATA9Q9BWV2 254 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 RTFDC1Q9BY42 306 aaPredicted RBP4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 RNF32Q9H0A6 362 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 CDH19Q9H159 772 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 FBXO9Q9UK97 447 aaPredicted RBP4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 INTUQ9ULD6 942 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 MAPRE3Q9UPY8 281 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 MYRFQ9Y2G1 1151 aa4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 POLR3KQ9Y2Y1 108 aaPredicted RBP4.9□□□□□ -1.63
CLNS1A-208ENST00000527265 DNAJC25-GNG10A0A024R161 153 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 UPK3BL1B0FP48 263 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 UPK3BL2E5RIL1 263 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 GFRA2O00451 464 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 IMPDH2P12268 514 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 CD53P19397 219 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 ERVFC1P60507 584 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 PLP2Q04941 152 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 LMOD3Q0VAK6 560 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 MTMR1Q13613 665 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 MLC1Q15049 377 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 RALGPS1Q5JS13 557 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 RUFY4Q6ZNE9 571 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 KRBA2Q6ZNG9 492 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 TMPRSS7Q7RTY8 843 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 STRA8Q7Z7C7 330 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 TCEAL8Q8IYN2 117 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 REXO1Q8N1G1 1221 aaKnown RBP4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 OXR1Q8N573 874 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 C19orf47Q8N9M1 422 aaKnown RBP4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 HOOK2Q96ED9 719 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 MTMR8Q96EF0 704 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 TEPSINQ96N21 525 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 GPR20Q99678 358 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 PALD1Q9ULE6 856 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 NOB1Q9ULX3 412 aaKnown RBP4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 PCDHB14Q9Y5E9 798 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 CSADQ9Y600 493 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 SNCAIPQ9Y6H5 919 aa4.89□□□□□ -1.63
CLNS1A-208ENST00000527265 A0A1W2PQH9 124 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 PRAMEF27A3QJZ7 478 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 PRPF3O43395 683 aaKnown RBP4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 EYA4O95677 639 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 RAPGEF1Q13905 1077 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 LONRF2Q1L5Z9 754 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 PPM1JQ5JR12 505 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 FAM102BQ5T8I3 360 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 WDR78Q5VTH9 848 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 NXNQ6DKJ4 435 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 ARMCX6Q7L4S7 300 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 EEPD1Q7L9B9 569 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 NECAB2Q7Z6G3 386 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 C12orf40Q86WS4 652 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 FAM9BQ8IZU0 186 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 ZBTB38Q8NAP3 1195 aaPredicted RBP4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 EHMT1Q9H9B1 1298 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 NCOA5Q9HCD5 579 aaKnown RBP4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 ZSWIM5Q9P217 1185 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 CORINQ9Y5Q5 1042 aa4.88□□□□□ -1.63
CLNS1A-208ENST00000527265 IRAK3Q9Y616 596 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms