RNA–Protein interactions for RNA: ENST00000516098.1

RNU6-240P-201, Transcript of RNA, U6 small nuclear 240, pseudogene, humanhuman

BASIC

Gene RNU6-240P, Length 97 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-240P-201ENST00000516098 ZNF512BQ96KM6 892 aaPredicted RBP2.42□□□□□ -2.02
RNU6-240P-201ENST00000516098 TMEM74Q96NL1 305 aa2.42□□□□□ -2.02
RNU6-240P-201ENST00000516098 RSRP1Q9BUV0 290 aa2.42□□□□□ -2.02
RNU6-240P-201ENST00000516098 LRRC3Q9BY71 257 aa2.42□□□□□ -2.02
RNU6-240P-201ENST00000516098 PPP4R1LQ9P1A2 415 aa2.42□□□□□ -2.02
RNU6-240P-201ENST00000516098 TNFRSF10CO14798 259 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 BRD1O95696 1058 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 TGM1P22735 817 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 POLR2BP30876 1174 aaKnown RBP2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 GBP2P32456 591 aaPredicted RBP2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 LRRFIP1Q32MZ4 808 aaKnown RBP2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 C9orf131Q5VYM1 1079 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 ZNF585AQ6P3V2 769 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 PALM2Q8IXS6 379 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 C7orf61Q8IZ16 206 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 AMER2Q8N7J2 671 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 GOLM1Q8NBJ4 401 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 TXNDC5Q8NBS9 432 aaKnown RBP2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 SMARCC1Q92922 1105 aaPredicted RBP2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 ATG4CQ96DT6 458 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 DDX11Q96FC9 970 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 SLC6A18Q96N87 628 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 PTCHD1Q96NR3 888 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 DUSP9Q99956 384 aaKnown RBP2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 C11orf84Q9BUA3 381 aaPredicted RBP2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 ING1Q9UK53 422 aaPredicted RBP2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 PCDHB14Q9Y5E9 798 aa2.41□□□□□ -2.02
RNU6-240P-201ENST00000516098 MEIS3P2A8K0S8 358 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 GPR42O15529 346 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 B4GALT3O60512 393 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 C8BP07358 591 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 NME1P15531 152 aaKnown RBP2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 EPHB4P54760 987 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 ABHD18Q0P651 414 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 R3HDM1Q15032 1099 aaKnown RBP2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 MCTP2Q6DN12 878 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 ETV3LQ6ZN32 361 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 ZC3H18Q86VM9 953 aaKnown RBP2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 TMEM192Q8IY95 271 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 LZTR1Q8N653 840 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 CHFRQ96EP1 664 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 DHRS1Q96LJ7 313 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 GORASP1Q9BQQ3 440 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 ZNF341Q9BYN7 854 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 C1orf115Q9H7X2 142 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 EHMT1Q9H9B1 1298 aa2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 SUCOQ9UBS9 1254 aaKnown RBP2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 SF3B6Q9Y3B4 125 aaKnown RBP2.4□□□□□ -2.03
RNU6-240P-201ENST00000516098 PATE3B3GLJ2 98 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 H0Y8X5 98 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 SHOXO15266 292 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 PPFIA2O75334 1257 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 ACRP10323 421 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 GARTP22102 1010 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 ITGAEP38570 1179 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 PPP2CBP62714 309 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 PPP2CAP67775 309 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 DAB2P98082 770 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 POU4F1Q01851 419 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 FAM160A1Q05DH4 1040 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 ANKRD39Q53RE8 183 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 HS1BP3Q53T59 392 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 MIIPQ5JXC2 388 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 SPDYAQ5MJ70 313 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 PRR31Q5SQ13 230 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 NOL9Q5SY16 702 aaKnown RBP2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 SLFN13Q68D06 897 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 ARHGEF18Q6ZSZ5 1173 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 DCP2Q8IU60 420 aaKnown RBP2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 CCDC144CPQ8IYA2 1237 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 FBXO27Q8NI29 283 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 IGDCC4Q8TDY8 1250 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 BCAS3Q9H6U6 928 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 BRMS1Q9HCU9 246 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 NGRNQ9NPE2 291 aaKnown RBP2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 KCNQ5Q9NR82 932 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 SUPT16HQ9Y5B9 1047 aaKnown RBP2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 FHOD1Q9Y613 1164 aa2.39□□□□□ -2.03
RNU6-240P-201ENST00000516098 TRBV23OR9-2A0A075B6M9 112 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 F6X3S4 739 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 TLR3O15455 904 aaKnown RBP2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 ZNF623O75123 536 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 CYP7B1O75881 506 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 CYP1A1P04798 512 aaPredicted RBP2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 MCM7P33993 719 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 NANOS3P60323 173 aaKnown RBP2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 DPTQ07507 201 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 PSMD2Q13200 908 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 FOXE3Q13461 319 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 EAPPQ56P03 285 aaPredicted RBP2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 EEF1DP3Q658K8 133 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 WWC2Q6AWC2 1192 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 RCSD1Q6JBY9 416 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 PKN3Q6P5Z2 889 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 MIB1Q86YT6 1006 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 REXO1Q8N1G1 1221 aaKnown RBP2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 FCRL3Q96P31 734 aaPredicted RBP2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 CEP89Q96ST8 783 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 AP5M1Q9H0R1 490 aa2.38□□□□□ -2.03
RNU6-240P-201ENST00000516098 RXFP1Q9HBX9 757 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms