RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RELTQ969Z4 430 aa3.95□□□□□ -1.78
PDGFC-208ENST00000512711 PHAXQ9H814 394 aaKnown RBP3.95□□□□□ -1.78
PDGFC-208ENST00000512711 GPRC5CQ9NQ84 441 aa3.95□□□□□ -1.78
PDGFC-208ENST00000512711 CGGBP1Q9UFW8 167 aaPredicted RBP3.95□□□□□ -1.78
PDGFC-208ENST00000512711 RWDD3Q9Y3V2 267 aa3.95□□□□□ -1.78
PDGFC-208ENST00000512711 A0A1B0GTL3 188 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 FFAR3O14843 346 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 PPM1BO75688 479 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 CYBBP04839 570 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 MC3RP41968 323 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 CASP7P55210 303 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 CYP4F3Q08477 520 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 NR1I3Q14994 352 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 MBLAC2Q68D91 279 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 RCSD1Q6JBY9 416 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 ZC3H14Q6PJT7 736 aaKnown RBP3.94□□□□□ -1.78
PDGFC-208ENST00000512711 C19orf47Q8N9M1 422 aaKnown RBP3.94□□□□□ -1.78
PDGFC-208ENST00000512711 DPF3Q92784 378 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 ANAPC16Q96DE5 110 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 RCC1LQ96I51 464 aaKnown RBP3.94□□□□□ -1.78
PDGFC-208ENST00000512711 SPATA32Q96LK8 384 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 SYT3Q9BQG1 590 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 GULP1Q9UBP9 304 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 MRVI1Q9Y6F6 885 aa3.94□□□□□ -1.78
PDGFC-208ENST00000512711 A0A1W2PQJ5 194 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 RFXAPO00287 272 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 FOXD2O60548 495 aaPredicted RBP3.93□□□□□ -1.78
PDGFC-208ENST00000512711 PLA2G1BP04054 148 aaKnown RBP3.93□□□□□ -1.78
PDGFC-208ENST00000512711 GLI4P10075 376 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 FOXO4P98177 505 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 EEF1DP3Q658K8 133 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 VHLLQ6RSH7 139 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 CYP2R1Q6VVX0 501 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 TMEM151BQ8IW70 566 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 HOMEZQ8IX15 550 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 SEC16BQ96JE7 1060 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 MTA3Q9BTC8 594 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 AKT3Q9Y243 479 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 INPP5FQ9Y2H2 1132 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 SUGT1Q9Y2Z0 365 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 SIT1Q9Y3P8 196 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 SLC12A7Q9Y666 1083 aa3.93□□□□□ -1.78
PDGFC-208ENST00000512711 C7orf72A4D263 438 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 SRGAP3O43295 1099 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 TBX1O43435 398 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 KCNH1O95259 989 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 ASGR2P07307 311 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 ATF4P18848 351 aaPredicted RBP3.92□□□□□ -1.78
PDGFC-208ENST00000512711 SEPHS1P49903 392 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 AMPD2Q01433 879 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 TMEM62Q0P6H9 643 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 INF2Q27J81 1249 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 OLFML2BQ68BL8 750 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 OR6P1Q8NGX9 317 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 MICAL1Q8TDZ2 1067 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 ZNF526Q8TF50 670 aaPredicted RBP3.92□□□□□ -1.78
PDGFC-208ENST00000512711 COPS5Q92905 334 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 ZNF428Q96B54 188 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 TGIF2Q9GZN2 237 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 GBP3Q9H0R5 595 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 CLEC1BQ9P126 229 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 EMC9Q9Y3B6 208 aa3.92□□□□□ -1.78
PDGFC-208ENST00000512711 NPHP3-ACAD11A0A0J9YXS1 232 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 ANKRD34BA5PLL1 514 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 SMAD7O15105 426 aaKnown RBP3.91□□□□□ -1.78
PDGFC-208ENST00000512711 FUCA1P04066 466 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 NTRK1P04629 796 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 PLS3P13797 630 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 ETFBP38117 255 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 SF1Q15637 639 aaKnown RBP3.91□□□□□ -1.78
PDGFC-208ENST00000512711 VWA3BQ502W6 1294 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 LZTR1Q8N653 840 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 LINC01356Q8N9X3 169 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 PLEKHO2Q8TD55 490 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 FNIP1Q8TF40 1166 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 NOX5Q96PH1 765 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 APBA2Q99767 749 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 ADAM7Q9H2U9 754 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 TMEFF2Q9UIK5 374 aaPredicted RBP3.91□□□□□ -1.78
PDGFC-208ENST00000512711 DBR1Q9UK59 544 aaKnown RBP3.91□□□□□ -1.78
PDGFC-208ENST00000512711 BACE2Q9Y5Z0 518 aa3.91□□□□□ -1.78
PDGFC-208ENST00000512711 PAMP19021 973 aa3.9□□□□□ -1.79
PDGFC-208ENST00000512711 PMLP29590 882 aa3.9□□□□□ -1.79
PDGFC-208ENST00000512711 SLURP1P55000 103 aa3.9□□□□□ -1.79
PDGFC-208ENST00000512711 CORO7P57737 925 aa3.9□□□□□ -1.79
PDGFC-208ENST00000512711 DLX2Q07687 328 aaPredicted RBP3.9□□□□□ -1.79
PDGFC-208ENST00000512711 SCRN1Q12765 414 aa3.9□□□□□ -1.79
PDGFC-208ENST00000512711 C6orf15Q6UXA7 325 aaPredicted RBP3.9□□□□□ -1.79
PDGFC-208ENST00000512711 BVESQ8NE79 360 aa3.9□□□□□ -1.79
PDGFC-208ENST00000512711 FRS2Q8WU20 508 aa3.9□□□□□ -1.79
PDGFC-208ENST00000512711 MRGPRX3Q96LB0 322 aa3.9□□□□□ -1.79
PDGFC-208ENST00000512711 B2RBV5 119 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 PRICKLE3O43900 615 aaPredicted RBP3.89□□□□□ -1.79
PDGFC-208ENST00000512711 SASH1O94885 1247 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 THBDP07204 575 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 NCAM1P13591 858 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 PFKLP17858 780 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 GRB10Q13322 594 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 TARBP2Q15633 366 aaKnown RBP3.89□□□□□ -1.79
PDGFC-208ENST00000512711 GTF2IRD2BQ6EKJ0 949 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms