RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 PTPN12Q05209 780 aaKnown RBP8.6□□□□□ -1.03
NR1I3-229ENST00000511748 NBPF9Q3BBW0 867 aa8.6□□□□□ -1.03
NR1I3-229ENST00000511748 PLA2G4EQ3MJ16 856 aa8.6□□□□□ -1.03
NR1I3-229ENST00000511748 ALG1LQ6GMV1 187 aa8.6□□□□□ -1.03
NR1I3-229ENST00000511748 FBF1Q8TES7 1133 aa8.6□□□□□ -1.03
NR1I3-229ENST00000511748 KLHDC7BQ96G42 594 aa8.6□□□□□ -1.03
NR1I3-229ENST00000511748 CWC25Q9NXE8 425 aaPredicted RBP8.6□□□□□ -1.03
NR1I3-229ENST00000511748 ANGEL1Q9UNK9 670 aaKnown RBP8.6□□□□□ -1.03
NR1I3-229ENST00000511748 C1QTNF9BB2RNN3 333 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 ADAM11O75078 769 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 ESRRAP11474 423 aaPredicted RBP8.59□□□□□ -1.03
NR1I3-229ENST00000511748 CAPN2P17655 700 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 PRMT2P55345 433 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 SP3Q02447 781 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 CALD1Q05682 793 aaKnown RBP8.59□□□□□ -1.03
NR1I3-229ENST00000511748 TNFAIP1Q13829 316 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 FOXD4L6Q3SYB3 417 aaPredicted RBP8.59□□□□□ -1.03
NR1I3-229ENST00000511748 FOXD4L3Q6VB84 417 aaPredicted RBP8.59□□□□□ -1.03
NR1I3-229ENST00000511748 MOB2Q70IA6 237 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 WNK4Q96J92 1243 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 DUSP9Q99956 384 aaKnown RBP8.59□□□□□ -1.03
NR1I3-229ENST00000511748 ANKRD2Q9GZV1 360 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 TRIOBPQ9H2D6 2365 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 BRCA2P51587 3418 aa8.59□□□□□ -1.03
NR1I3-229ENST00000511748 PRPF40AO75400 957 aaKnown RBP8.58□□□□□ -1.04
NR1I3-229ENST00000511748 CCT4P50991 539 aaKnown RBP8.58□□□□□ -1.04
NR1I3-229ENST00000511748 FKBP1AP62942 108 aaKnown RBP8.58□□□□□ -1.04
NR1I3-229ENST00000511748 DLGAP5Q15398 846 aa8.58□□□□□ -1.04
NR1I3-229ENST00000511748 SLC9C1Q4G0N8 1177 aa8.58□□□□□ -1.04
NR1I3-229ENST00000511748 TTLL5Q6EMB2 1281 aa8.58□□□□□ -1.04
NR1I3-229ENST00000511748 ALYREFQ86V81 257 aaKnown RBP8.58□□□□□ -1.04
NR1I3-229ENST00000511748 ANKRD13AQ8IZ07 590 aa8.58□□□□□ -1.04
NR1I3-229ENST00000511748 SLC7A3Q8WY07 619 aa8.58□□□□□ -1.04
NR1I3-229ENST00000511748 ZNF333Q96JL9 665 aa8.58□□□□□ -1.04
NR1I3-229ENST00000511748 DEFB129Q9H1M3 183 aa8.58□□□□□ -1.04
NR1I3-229ENST00000511748 ZNF576Q9H609 170 aa8.58□□□□□ -1.04
NR1I3-229ENST00000511748 ZCCHC17Q9NP64 241 aaKnown RBP8.58□□□□□ -1.04
NR1I3-229ENST00000511748 SEC31BQ9NQW1 1179 aa8.58□□□□□ -1.04
NR1I3-229ENST00000511748 ZNF804BA4D1E1 1349 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 MYH3P11055 1940 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 WISP1O95388 367 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 IGHMBP2P38935 993 aaKnown RBP8.57□□□□□ -1.04
NR1I3-229ENST00000511748 FCGRTP55899 365 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 CTSWP56202 376 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 ATP2B2Q01814 1243 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 PCDH1Q08174 1060 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 FAAP100Q0VG06 881 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 NEXNQ0ZGT2 675 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 IKBKEQ14164 716 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 KIF22Q14807 665 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 RALBP1Q15311 655 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 SLC4A8Q2Y0W8 1093 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 C3orf58Q8NDZ4 430 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 ZBED3Q96IU2 234 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-229ENST00000511748 MINPP1Q9UNW1 487 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 ECM29Q5VYK3 1845 aa8.57□□□□□ -1.04
NR1I3-229ENST00000511748 IGF2BP3O00425 579 aaKnown RBP eCLIP8.56□□□□□ -1.04
NR1I3-229ENST00000511748 SASH1O94885 1247 aa8.56□□□□□ -1.04
NR1I3-229ENST00000511748 CRHR2Q13324 411 aa8.56□□□□□ -1.04
NR1I3-229ENST00000511748 PRAMEF18Q5VWM3 479 aa8.56□□□□□ -1.04
NR1I3-229ENST00000511748 DUSP27Q5VZP5 1158 aa8.56□□□□□ -1.04
NR1I3-229ENST00000511748 FOXD4L4Q8WXT5 416 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-229ENST00000511748 FAM161BQ96MY7 647 aa8.56□□□□□ -1.04
NR1I3-229ENST00000511748 METTL22Q9BUU2 404 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-229ENST00000511748 CLEC4MQ9H2X3 399 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-229ENST00000511748 R3HDMLQ9H3Y0 253 aa8.56□□□□□ -1.04
NR1I3-229ENST00000511748 PARP2Q9UGN5 583 aa8.56□□□□□ -1.04
NR1I3-229ENST00000511748 A0A1W2PPC1 479 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 ERCC3P19447 782 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 EN2P19622 333 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-229ENST00000511748 CD68P34810 354 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-229ENST00000511748 KCNJ4P48050 445 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 GTF2A2P52657 109 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 C15orf52Q6ZUT6 534 aaKnown RBP8.55□□□□□ -1.04
NR1I3-229ENST00000511748 KIAA0825Q8IV33 1275 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 MAP4K3Q8IVH8 894 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 TTLL11Q8NHH1 800 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 CD99L2Q8TCZ2 262 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 LENG1Q96BZ8 264 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-229ENST00000511748 RUNDC1Q96C34 613 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 HOOK2Q96ED9 719 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 MPHOSPH8Q99549 860 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 MYD88Q99836 296 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 HTATIP2Q9BUP3 242 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 LAS1LQ9Y4W2 734 aaKnown RBP8.55□□□□□ -1.04
NR1I3-229ENST00000511748 CUL9Q8IWT3 2517 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 COL4A1P02462 1669 aa8.55□□□□□ -1.04
NR1I3-229ENST00000511748 ZNF646O15015 1829 aaPredicted RBP8.54□□□□□ -1.04
NR1I3-229ENST00000511748 ALX3O95076 343 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 GNA15P30679 374 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 GNAI1P63096 354 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 PRKG1Q13976 671 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 CCDC30Q5VVM6 783 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 FAM117BQ6P1L5 589 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 IGF2-ASQ6U949 168 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 KLHL23Q8NBE8 558 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 UBASH3BQ8TF42 649 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 WNT8BQ93098 351 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 C12orf49Q9H741 205 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 SRA1Q9HD15 236 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms