RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ACRBPQ8NEB7 543 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 TRIM58Q8NG06 486 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 TTLL11Q8NHH1 800 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 NUP133Q8WUM0 1156 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 NELFBQ8WX92 580 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 JAKMIP2Q96AA8 810 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 ALS2CR12Q96Q35 445 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 SLF1Q9BQI6 1058 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 TACO1Q9BSH4 297 aaKnown RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 MYL10Q9BUA6 226 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 LUC7LQ9NQ29 371 aaKnown RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 GNL3LQ9NVN8 582 aaKnown RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 GOLGA6AQ9NYA3 693 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 FAM184BQ9ULE4 1060 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 GUCA1BQ9UMX6 200 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 SLC4A4Q9Y6R1 1079 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 BCL9LQ86UU0 1499 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 PAPPAQ13219 1627 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 PDS5AQ29RF7 1337 aaKnown RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 ECM29Q5VYK3 1845 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 GSG1L2A8MUP6 293 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 VGLL3A8MV65 326 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 ERVV-1B6SEH8 477 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 LAD1O00515 517 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 IRS4O14654 1257 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 SPTLC1O15269 473 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 HSF2BPO75031 334 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 KIAA0754O94854 1291 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 FGFR1OPO95684 399 aaKnown RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 PARP1P09874 1014 aaKnown RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 EPB41P11171 864 aaKnown RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 IL2RBP14784 551 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 TCP1P17987 556 aaKnown RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 FGFR2P21802 821 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 KIF5BP33176 963 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCT6AP40227 531 aaKnown RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 STAT6P42226 847 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 PAFAH1B1P43034 410 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 EPHB4P54760 987 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 GYS2P54840 703 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 ERVK-24P63145 666 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZBED6P86452 979 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 PRR20EP86478 221 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 PRR20CP86479 221 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 PRR20DP86480 221 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 PRR20BP86481 221 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 PRR20AP86496 221 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 GRIN1Q05586 938 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 CTDSPL2Q05D32 466 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 PPARAQ07869 468 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 FOXC1Q12948 553 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 NR5A1Q13285 461 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 MEA1Q16626 185 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 FIGNQ5HY92 759 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 RRP12Q5JTH9 1297 aaKnown RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 FKBP15Q5T1M5 1219 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 IFIT1BQ5T764 474 aaKnown RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 GALNT17Q6IS24 598 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 EMBQ6PCB8 327 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCNI2Q6ZMN8 369 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 MMS22LQ6ZRQ5 1243 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 ARHGAP27Q6ZUM4 889 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZNF572Q7Z3I7 529 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCDC91Q7Z6B0 441 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 TADA2BQ86TJ2 420 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 RPAINQ86UA6 219 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 NLRP10Q86W26 655 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 VGLL2Q8N8G2 317 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 SECISBP2LQ93073 1101 aaKnown RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 FAM89AQ96GI7 184 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 DHTKD1Q96HY7 919 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 MED15Q96RN5 788 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZSCAN10Q96SZ4 725 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 CAPS2Q9BXY5 557 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 VPS16Q9H269 839 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 ARMT1Q9H993 441 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 SENP2Q9HC62 589 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 EPB41L4AQ9HCS5 686 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 SH3GLB2Q9NR46 395 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 EXOC1Q9NV70 894 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 TAB2Q9NYJ8 693 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 TMOD3Q9NYL9 352 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 RNF14Q9UBS8 474 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 JRKLQ9Y4A0 524 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 COL18A1P39060 1754 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 RGPD5Q99666 1765 aa5.54□□□□□ -1.52
HMGB3P16-201ENST00000508037 ADAMTSL3P82987 1691 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 TNKSO95271 1327 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 SOS2Q07890 1332 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 COL22A1Q8NFW1 1626 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 SRRM3A6NNA2 597 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 NUTM2BA6NNL0 878 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 LRRIQ3A6PVS8 624 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 NUTM2EB1AL46 878 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 N4BP1O75113 896 aaKnown RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 ERLIN2O94905 339 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 PRPF6O94906 941 aaKnown RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 SYF2O95926 243 aaKnown RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 SRGNP10124 158 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms