RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 RASSF4Q9H2L5 321 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 IFT122Q9HBG6 1241 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 POLMQ9NP87 494 aaPredicted RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 EMC7Q9NPA0 242 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 PDP2Q9P2J9 529 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 SAP30BPQ9UHR5 308 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 FBXO2Q9UK22 296 aaPredicted RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 RCAN3Q9UKA8 241 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 KCNH4Q9UQ05 1017 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 RABGAP1Q9Y3P9 1069 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 ABCA8O94911 1581 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 FRMPD1Q5SYB0 1578 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 JCADQ9P266 1359 aa2.34□□□□□ -2.04
UBR4-217ENST00000497018 NINLQ9Y2I6 1382 aa2.34□□□□□ -2.04
UBR4-217ENST00000497018 SIGLEC1Q9BZZ2 1709 aa2.34□□□□□ -2.04
UBR4-217ENST00000497018 PLA2R1Q13018 1463 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 XIRP1Q702N8 1843 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 EFCAB5A4FU69 1503 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 ARHGEF12Q9NZN5 1544 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 BLACEA4D250 179 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 A6NCN8 305 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 FAM86C2PA6NEL3 165 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 CHURC1-FNTBB4DL54 471 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 RASA4BC9J798 803 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 F5H423 210 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 H3BRJ5 948 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 J3KRW8 73 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 SHOXO15266 292 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 RASA4O43374 803 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 UBOX5O94941 541 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 FKBP9O95302 570 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 SOD2P04179 222 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 GSTP1P09211 210 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 PYGMP11217 842 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 ESRRAP11474 423 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 PLCG1P19174 1290 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 NFKB1P19838 968 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 CAPN3P20807 821 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 CTSOP43234 321 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 GRK6P43250 576 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 CCT5P48643 541 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 MECP2P51608 486 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 GFRA1P56159 465 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 RBM6P78332 1123 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 GPLD1P80108 840 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 RBM10P98175 930 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 PLAURQ03405 335 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 POU4F2Q12837 409 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 MAP4K2Q12851 820 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 FOXC1Q12948 553 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 TBX2Q13207 712 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 NEUROD1Q13562 356 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 SEMA5AQ13591 1074 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 UBAP2LQ14157 1087 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 BBS9Q3SYG4 887 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 ATAT1Q5SQI0 421 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 SLC35F1Q5T1Q4 408 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 ZNF697Q5TEC3 545 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 PIK3R6Q5UE93 754 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 TDRD10Q5VZ19 366 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 IQSEC1Q6DN90 963 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 MZT2BQ6NZ67 158 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 CFAP161Q6P656 301 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 TLDC1Q6P9B6 456 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 FIGNL1Q6PIW4 674 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 LIAT1Q6ZQX7 453 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 FKBP9P1Q75LS8 142 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 CYFIP1Q7L576 1253 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 OVCH2Q7RTZ1 564 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 MAMDC2Q7Z304 686 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 SRGAP1Q7Z6B7 1085 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 CATIPQ7Z7H3 387 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 PNMA8AQ86V59 439 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 TRIM59Q8IWR1 403 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 SLFN12Q8IYM2 578 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 NXPE1Q8N323 547 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 NKAIN3Q8N8D7 197 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 GIMAP8Q8ND71 665 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 DEPTORQ8TB45 409 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 RNF217Q8TC41 542 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 GPBAR1Q8TDU6 330 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 ASAP3Q8TDY4 903 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 BSNDQ8WZ55 320 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 PTPRN2Q92932 1015 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 ACSF2Q96CM8 615 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 FAXDC2Q96IV6 333 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 LRGUKQ96M69 825 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 TTC14Q96N46 770 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 SLC6A18Q96N87 628 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 NSUN5Q96P11 429 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 IPO9Q96P70 1041 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 POP1Q99575 1024 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 MYD88Q99836 296 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 CRB3Q9BUF7 120 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 KRTAP3-3Q9BYR6 98 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 KRTAP3-2Q9BYR7 98 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 WDR12Q9GZL7 423 aaKnown RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 RSPH9Q9H1X1 276 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 ALDH8A1Q9H2A2 487 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 AGO4Q9HCK5 861 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms