RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 SLF1Q9BQI6 1058 aa10.49□□□□□ -0.73
TM4SF1-203ENST00000493298 SPZ1Q9BXG8 430 aa10.49□□□□□ -0.73
TM4SF1-203ENST00000493298 MROH8Q9H579 483 aa10.49□□□□□ -0.73
TM4SF1-203ENST00000493298 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
TM4SF1-203ENST00000493298 ORC3Q9UBD5 711 aaPredicted RBP10.49□□□□□ -0.73
TM4SF1-203ENST00000493298 BIN2Q9UBW5 565 aaPredicted RBP10.49□□□□□ -0.73
TM4SF1-203ENST00000493298 SMC3Q9UQE7 1217 aa10.49□□□□□ -0.73
TM4SF1-203ENST00000493298 H0YGN5 161 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 M0R2N6 131 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 WNT7AO00755 349 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 OPLAHO14841 1288 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 CALM1P0DP23 149 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 CALM2P0DP24 149 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 CALM3P0DP25 149 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 STAT3P40763 770 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 FOSBP53539 338 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 GUCY1B3Q02153 619 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 TRMT44Q8IYL2 757 aaKnown RBP10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 ADGRF4Q8IZF3 695 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 ANKLE1Q8NAG6 615 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 PRPF38AQ8NAV1 312 aaKnown RBP10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 FBXO18Q8NFZ0 1043 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 DCAF4Q8WV16 495 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 TNPO1Q92973 898 aaKnown RBP10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 PAWRQ96IZ0 340 aaKnown RBP10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 SLC26A6Q9BXS9 759 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 RNF26Q9BY78 433 aaPredicted RBP10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 HMX1Q9NP08 348 aaPredicted RBP10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 CHMP5Q9NZZ3 219 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 PCDH10Q9P2E7 1040 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 CIZ1Q9ULV3 898 aaPredicted RBP10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 KCNJ14Q9UNX9 436 aa10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.48□□□□□ -0.73
TM4SF1-203ENST00000493298 A0A0C4DFX4 3053 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 ADCY6O43306 1168 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 STX6O43752 255 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 SLC34A2O95436 690 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 PGK2P07205 417 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 PARP1P09874 1014 aaKnown RBP10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 CAPN2P17655 700 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 PPP2R5BQ15173 497 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 PFKFB3Q16875 520 aaPredicted RBP10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 FOXD4L5Q5VV16 416 aaPredicted RBP10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 KRT40Q6A162 431 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 WWC2Q6AWC2 1192 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 CLEC17AQ6ZS10 378 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 FOXD4L4Q8WXT5 416 aaPredicted RBP10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 PIBF1Q8WXW3 757 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 GPKOWQ92917 476 aaPredicted RBP eCLIP10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 KATNBL1Q9H079 304 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 RBM28Q9NW13 759 aaKnown RBP10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 PRUNE2Q8WUY3 3088 aa10.47□□□□□ -0.73
TM4SF1-203ENST00000493298 CHD7Q9P2D1 2997 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 TMEM232C9JQI7 657 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 STXBP3O00186 592 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 SLC25A27O95847 323 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 SNAI1O95863 264 aaPredicted RBP10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 ZNF865P0CJ78 1059 aaPredicted RBP10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 ZSCAN22P10073 491 aaPredicted RBP10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 BMP3P12645 472 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 SSRP1Q08945 709 aaKnown RBP10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 ASPRV1Q53RT3 343 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 PRAMEF19Q5SWL8 479 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 LARP1BQ659C4 914 aaKnown RBP10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 MAMDC4Q6UXC1 1216 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 NCAPG2Q86XI2 1143 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 CTCFLQ8NI51 663 aaPredicted RBP10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 ALG1Q9BT22 464 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 PHF20Q9BVI0 1012 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 TEX13BQ9BXU2 312 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 VAT1LQ9HCJ6 419 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 VPS54Q9P1Q0 977 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 FEM1BQ9UK73 627 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 PRR12Q9ULL5 1215 aa10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 DIS3Q9Y2L1 958 aaKnown RBP10.46□□□□□ -0.73
TM4SF1-203ENST00000493298 UNC80Q8N2C7 3258 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 DEXIO95424 95 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 F13A1P00488 732 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 TFRCP02786 760 aaKnown RBP10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 FCER1AP12319 257 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 SCG2P13521 617 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 SLC1A4P43007 532 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 TOB1P50616 345 aaPredicted RBP10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 OAZ1P54368 228 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 PLS1Q14651 629 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 QRICH1Q2TAL8 776 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 WDR78Q5VTH9 848 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 SNRNP48Q6IEG0 339 aaKnown RBP10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 SYNE3Q6ZMZ3 975 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 FERMT3Q86UX7 667 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 TBC1D5Q92609 795 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 RAVER2Q9HCJ3 691 aaKnown RBP10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 DDX20Q9UHI6 824 aaKnown RBP10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 IVNS1ABPQ9Y6Y0 642 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 REV3LO60673 3130 aa10.45□□□□□ -0.74
TM4SF1-203ENST00000493298 CCDC196A0A1B0GTZ2 297 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 BTBD18B2RXH4 712 aa10.44□□□□□ -0.74
TM4SF1-203ENST00000493298 DHX16O60231 1041 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms