RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 CLEC4DQ8WXI8 215 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 MYLIPQ8WY64 445 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.84□□□□□ -1.15
FN1-220ENST00000480024 SEMA6BQ9H3T3 888 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 OSBPL3Q9H4L5 887 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 ADD3Q9UEY8 706 aaKnown RBP7.84□□□□□ -1.15
FN1-220ENST00000480024 PRUNE2Q8WUY3 3088 aa7.84□□□□□ -1.15
FN1-220ENST00000480024 TNKSO95271 1327 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 UMODL1Q5DID0 1318 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 WDR19Q8NEZ3 1342 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 CHD9Q3L8U1 2897 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 SCN10AQ9Y5Y9 1956 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 B4E1Z4 1266 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 HIP1O00291 1037 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 CABYRO75952 493 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 CD4P01730 458 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 SNHG28P0DPA3 235 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 ACRP10323 421 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 FOSL2P15408 326 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 DNAJB2P25686 324 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 CYP2C18P33260 490 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 RPS6P62753 249 aaKnown RBP7.83□□□□□ -1.16
FN1-220ENST00000480024 PDE4DQ08499 809 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 ITGA7Q13683 1181 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 CDC37Q16543 378 aaPredicted RBP7.83□□□□□ -1.16
FN1-220ENST00000480024 GPATCH4Q5T3I0 446 aaKnown RBP7.83□□□□□ -1.16
FN1-220ENST00000480024 IQSEC1Q6DN90 963 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 IQCA1Q86XH1 822 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.83□□□□□ -1.16
FN1-220ENST00000480024 TMEM199Q8N511 208 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 PNMA1Q8ND90 353 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 MAFAQ8NHW3 353 aaPredicted RBP7.83□□□□□ -1.16
FN1-220ENST00000480024 MORC4Q8TE76 937 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 TTC14Q96N46 770 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 WDR11Q9BZH6 1224 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 UBA5Q9GZZ9 404 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 TRPV6Q9H1D0 765 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 IL25Q9H293 177 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 HIPK3Q9H422 1215 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 KAT14Q9H8E8 782 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 TANC1Q9C0D5 1861 aa7.83□□□□□ -1.16
FN1-220ENST00000480024 GRIN2DO15399 1336 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 KIAA1217Q5T5P2 1943 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 TMEM265A0A087WTH1 108 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 DHX16O60231 1041 aaKnown RBP7.82□□□□□ -1.16
FN1-220ENST00000480024 B4GALT4O60513 344 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 MYL3P08590 195 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 CCL23P55773 120 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 SCN5AQ14524 2016 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 PPP2R5BQ15173 497 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 IMMTQ16891 758 aaKnown RBP7.82□□□□□ -1.16
FN1-220ENST00000480024 DUSP28Q4G0W2 176 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 TMEM240Q5SV17 173 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 PSRC1Q6PGN9 363 aaPredicted RBP7.82□□□□□ -1.16
FN1-220ENST00000480024 ZNF365Q70YC5 407 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 C16orf59Q7L2K0 433 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 DGKHQ86XP1 1220 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 ENAHQ8N8S7 591 aaPredicted RBP7.82□□□□□ -1.16
FN1-220ENST00000480024 SLC43A3Q8NBI5 491 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 OR6J1Q8NGC5 347 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 TIFAQ96CG3 184 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 ZSCAN10Q96SZ4 725 aaPredicted RBP7.82□□□□□ -1.16
FN1-220ENST00000480024 MPHOSPH6Q99547 160 aaKnown RBP7.82□□□□□ -1.16
FN1-220ENST00000480024 UBAC1Q9BSL1 405 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 DSCC1Q9BVC3 393 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 PNMA2Q9UL42 364 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 Q9Y3F1 56 aa7.82□□□□□ -1.16
FN1-220ENST00000480024 BAZ2BQ9UIF8 2168 aaKnown RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 ABCB11O95342 1321 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 RAD50Q92878 1312 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 LOC102724159A0A0B4J2E5 919 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 GRXCR1A8MXD5 290 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 GSPT1P15170 499 aaKnown RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 EDNRBP24530 442 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 PDE4AP27815 886 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 PBX2P40425 430 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 CPT1AP50416 773 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 IRX6P78412 446 aaPredicted RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 PURAQ00577 322 aaKnown RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 PWP2Q15269 919 aaKnown RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 QRICH1Q2TAL8 776 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 ASPRV1Q53RT3 343 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 CCDC178Q5BJE1 867 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 FAM47CQ5HY64 1035 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 ADGRF4Q8IZF3 695 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 PPP1R13LQ8WUF5 828 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 COPS5Q92905 334 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 KRT23Q9C075 422 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 WNT8AQ9H1J5 351 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 ALDH8A1Q9H2A2 487 aaPredicted RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 IL23AQ9NPF7 189 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 GPHNQ9NQX3 736 aaPredicted RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 TRMT13Q9NUP7 481 aaKnown RBP7.81□□□□□ -1.16
FN1-220ENST00000480024 POLR3EQ9NVU0 708 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 CTNNA3Q9UI47 895 aa7.81□□□□□ -1.16
FN1-220ENST00000480024 RBM47A0AV96 593 aaKnown RBP7.8□□□□□ -1.16
FN1-220ENST00000480024 B4DLN1 442 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms