RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ANKS3Q6ZW76 656 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 ARHGEF39Q8N4T4 335 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 AFAP1Q8N556 730 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 APBA2Q99767 749 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 FAM53CQ9NYF3 392 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 TNFRSF10DQ9UBN6 386 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 GPR160Q9UJ42 338 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 SHANK2Q9UPX8 1470 aa7.14□□□□□ -1.27
VPS50-214ENST00000477935 GPR55Q9Y2T6 319 aaPredicted RBP7.14□□□□□ -1.27
VPS50-214ENST00000477935 R3HCC1Q9Y3T6 440 aaKnown RBP7.14□□□□□ -1.27
VPS50-214ENST00000477935 LRRC10BA6NIK2 292 aa7.13□□□□□ -1.27
VPS50-214ENST00000477935 NAT2P11245 290 aa7.13□□□□□ -1.27
VPS50-214ENST00000477935 IFNGR1P15260 489 aa7.13□□□□□ -1.27
VPS50-214ENST00000477935 RTP1P59025 263 aa7.13□□□□□ -1.27
VPS50-214ENST00000477935 SNX17Q15036 470 aa7.13□□□□□ -1.27
VPS50-214ENST00000477935 SLC14A2Q15849 920 aa7.13□□□□□ -1.27
VPS50-214ENST00000477935 TMEM52Q8NDY8 209 aa7.13□□□□□ -1.27
VPS50-214ENST00000477935 CWC22Q9HCG8 908 aaKnown RBP7.13□□□□□ -1.27
VPS50-214ENST00000477935 ZNF518AQ6AHZ1 1483 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 FGF10O15520 208 aaPredicted RBP7.12□□□□□ -1.27
VPS50-214ENST00000477935 NRDCO43847 1150 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 VAMP4O75379 141 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 TXKP42681 527 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 GALK1P51570 392 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 GRB10Q13322 594 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 MLANAQ16655 118 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 MRM1Q6IN84 353 aaKnown RBP7.12□□□□□ -1.27
VPS50-214ENST00000477935 SLCO6A1Q86UG4 719 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 NAT16Q8N8M0 369 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 SHISA4Q96DD7 197 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 MCMBPQ9BTE3 642 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 TANGO6Q9C0B7 1094 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 AKT3Q9Y243 479 aa7.12□□□□□ -1.27
VPS50-214ENST00000477935 STXBP3O00186 592 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 KLF4O43474 513 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 GJB6O95452 261 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 AMPD2Q01433 879 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 DPY19L1Q2PZI1 675 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 HSF5Q4G112 596 aaPredicted RBP7.11□□□□□ -1.27
VPS50-214ENST00000477935 PRR23BQ6ZRT6 265 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 NLRX1Q86UT6 975 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 ANKLE2Q86XL3 938 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 CELF2-AS1Q8N7Q2 184 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 BVESQ8NE79 360 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 YBX2Q9Y2T7 364 aaKnown RBP7.11□□□□□ -1.27
VPS50-214ENST00000477935 EMC9Q9Y3B6 208 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 C3P01024 1663 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 REREQ9P2R6 1566 aa7.11□□□□□ -1.27
VPS50-214ENST00000477935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS50-214ENST00000477935 A0A1W2PQ45 241 aaPredicted RBP7.1□□□□□ -1.27
VPS50-214ENST00000477935 A0A1W2PQY0 241 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 AURKAO14965 403 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 SUSD5O60279 629 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 KCNH1O95259 989 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 POMZP3Q6PJE2 187 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 CYP2R1Q6VVX0 501 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 SIRT2Q8IXJ6 389 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 POU5F2Q8N7G0 328 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 PPP1R14AQ96A00 147 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 INTS4Q96HW7 963 aaKnown RBP7.1□□□□□ -1.27
VPS50-214ENST00000477935 PLCD4Q9BRC7 762 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 SLC6A17Q9H1V8 727 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 ST7Q9NRC1 585 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 TAF6LQ9Y6J9 622 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 MLH3Q9UHC1 1453 aa7.1□□□□□ -1.27
VPS50-214ENST00000477935 WTIPA6NIX2 430 aaPredicted RBP7.09□□□□□ -1.27
VPS50-214ENST00000477935 STK10O94804 968 aaKnown RBP7.09□□□□□ -1.27
VPS50-214ENST00000477935 ATP2B1P20020 1258 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 DDR2Q16832 855 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 HLA-DQA1Q5Y7H0 255 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 RCSD1Q6JBY9 416 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 GALNT18Q6P9A2 607 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 TRIM59Q8IWR1 403 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 CRACR2BQ8N4Y2 399 aaPredicted RBP7.09□□□□□ -1.27
VPS50-214ENST00000477935 PTCHD1Q96NR3 888 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 JMJD8Q96S16 334 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 DIRC2Q96SL1 478 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 LGR4Q9BXB1 951 aa7.09□□□□□ -1.27
VPS50-214ENST00000477935 NSUN3Q9H649 340 aaKnown RBP7.09□□□□□ -1.27
VPS50-214ENST00000477935 CDK11AQ9UQ88 783 aaPredicted RBP7.09□□□□□ -1.27
VPS50-214ENST00000477935 NUP153P49790 1475 aaKnown RBP7.09□□□□□ -1.27
VPS50-214ENST00000477935 NOP56O00567 594 aaKnown RBP7.08□□□□□ -1.28
VPS50-214ENST00000477935 TBC1D8O95759 1140 aa7.08□□□□□ -1.28
VPS50-214ENST00000477935 RAB33AQ14088 237 aa7.08□□□□□ -1.28
VPS50-214ENST00000477935 KIR3DS1Q14943 382 aa7.08□□□□□ -1.28
VPS50-214ENST00000477935 SV2CQ496J9 727 aa7.08□□□□□ -1.28
VPS50-214ENST00000477935 EEF1DP3Q658K8 133 aa7.08□□□□□ -1.28
VPS50-214ENST00000477935 EEPD1Q7L9B9 569 aa7.08□□□□□ -1.28
VPS50-214ENST00000477935 CKAP2LQ8IYA6 745 aa7.08□□□□□ -1.28
VPS50-214ENST00000477935 THEMISQ8N1K5 641 aaPredicted RBP7.08□□□□□ -1.28
VPS50-214ENST00000477935 MRGPRX3Q96LB0 322 aa7.08□□□□□ -1.28
VPS50-214ENST00000477935 BACE2Q9Y5Z0 518 aa7.08□□□□□ -1.28
VPS50-214ENST00000477935 C2orf71A6NGG8 1288 aa7.07□□□□□ -1.28
VPS50-214ENST00000477935 FARP2O94887 1054 aaPredicted RBP7.07□□□□□ -1.28
VPS50-214ENST00000477935 SEPHS1P49903 392 aa7.07□□□□□ -1.28
VPS50-214ENST00000477935 MESP2Q0VG99 397 aa7.07□□□□□ -1.28
VPS50-214ENST00000477935 ZNF648Q5T619 568 aaPredicted RBP7.07□□□□□ -1.28
VPS50-214ENST00000477935 ZNF772Q68DY9 489 aaPredicted RBP7.07□□□□□ -1.28
VPS50-214ENST00000477935 JAMLQ86YT9 394 aa7.07□□□□□ -1.28
VPS50-214ENST00000477935 IRF2BP1Q8IU81 584 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms