RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 ADCY3O60266 1144 aa6.92□□□□□ -1.3
USP25-207ENST00000464435 TBC1D8O95759 1140 aa6.92□□□□□ -1.3
USP25-207ENST00000464435 MPOP05164 745 aa6.92□□□□□ -1.3
USP25-207ENST00000464435 YBX1P67809 324 aaKnown RBP6.92□□□□□ -1.3
USP25-207ENST00000464435 ADGRF1Q5T601 910 aa6.92□□□□□ -1.3
USP25-207ENST00000464435 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
USP25-207ENST00000464435 ATG14Q6ZNE5 492 aa6.92□□□□□ -1.3
USP25-207ENST00000464435 ZNF605Q86T29 641 aa6.92□□□□□ -1.3
USP25-207ENST00000464435 TMEM52Q8NDY8 209 aa6.92□□□□□ -1.3
USP25-207ENST00000464435 MYOCOSA0A1B0GUC4 107 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 ANKRD34BA5PLL1 514 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 FAM153BP0C7A2 387 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 CANXP27824 592 aaKnown RBP6.91□□□□□ -1.3
USP25-207ENST00000464435 CEBPAP49715 358 aaPredicted RBP6.91□□□□□ -1.3
USP25-207ENST00000464435 CORO7P57737 925 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 DLG4P78352 724 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 CYP4F8P98187 520 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 GRB10Q13322 594 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 SV2CQ496J9 727 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 TMEM132EQ6IEE7 984 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 RCSD1Q6JBY9 416 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 ARHGEF39Q8N4T4 335 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 ZNF513Q8N8E2 541 aaPredicted RBP6.91□□□□□ -1.3
USP25-207ENST00000464435 JMYQ8N9B5 988 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 NLGN2Q8NFZ4 835 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 THAP3Q8WTV1 239 aaPredicted RBP6.91□□□□□ -1.3
USP25-207ENST00000464435 ZNF669Q96BR6 464 aaPredicted RBP6.91□□□□□ -1.3
USP25-207ENST00000464435 FCRL3Q96P31 734 aaPredicted RBP6.91□□□□□ -1.3
USP25-207ENST00000464435 PLCD4Q9BRC7 762 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 SPATA9Q9BWV2 254 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 NOL6Q9H6R4 1146 aaKnown RBP6.91□□□□□ -1.3
USP25-207ENST00000464435 TMEM260Q9NX78 707 aa6.91□□□□□ -1.3
USP25-207ENST00000464435 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.91□□□□□ -1.3
USP25-207ENST00000464435 CDC45O75419 566 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 EFEMP2O95967 443 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 PRKCAP17252 672 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 HSD3B2P26439 372 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 KCNA10Q16322 511 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 EEF1DP3Q658K8 133 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 AMIGO3Q86WK7 504 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 JAMLQ86YT9 394 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 SIRT2Q8IXJ6 389 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 CRACR2BQ8N4Y2 399 aaPredicted RBP6.9□□□□□ -1.3
USP25-207ENST00000464435 ADCY4Q8NFM4 1077 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 EPN3Q9H201 632 aa6.9□□□□□ -1.3
USP25-207ENST00000464435 SMG5Q9UPR3 1016 aaKnown RBP6.9□□□□□ -1.3
USP25-207ENST00000464435 SBNO2Q9Y2G9 1366 aa6.9□□□□□ -1.31
USP25-207ENST00000464435 A0A1W2PQU0 124 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 TBX1O43435 398 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 CFPP27918 469 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 CBX2Q14781 532 aaPredicted RBP6.89□□□□□ -1.31
USP25-207ENST00000464435 NR1I3Q14994 352 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 TKFCQ3LXA3 575 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 FOXB2Q5VYV0 432 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 ADAT2Q7Z6V5 191 aaKnown RBP6.89□□□□□ -1.31
USP25-207ENST00000464435 ZNF227Q86WZ6 799 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 LRRC56Q8IYG6 542 aaPredicted RBP6.89□□□□□ -1.31
USP25-207ENST00000464435 NUP43Q8NFH3 380 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 PPP1R14AQ96A00 147 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 ZDHHC15Q96MV8 337 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 PTCHD1Q96NR3 888 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 JMJD8Q96S16 334 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 TNFRSF12AQ9NP84 129 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 ARHGEF4Q9NR80 690 aa6.89□□□□□ -1.31
USP25-207ENST00000464435 TRBV23OR9-2A0A075B6M9 112 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 A0A1W2PQ27 194 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 A0A1W2PQ64 194 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 A0A1W2PQC6 194 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 A0A1W2PQD8 194 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 ANKRD62A6NC57 917 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 AURKAO14965 403 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 ITGAVP06756 1048 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 CD3EP07766 207 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 PLEKHG4Q58EX7 1191 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 YOD1Q5VVQ6 348 aaPredicted RBP6.88□□□□□ -1.31
USP25-207ENST00000464435 CIAPIN1Q6FI81 312 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 POMZP3Q6PJE2 187 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 APPBP2Q92624 585 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 APBA2Q99767 749 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 KRTAP17-1Q9BYP8 105 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 KCNK12Q9HB15 430 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 SIRT5Q9NXA8 310 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 IMPACTQ9P2X3 320 aa6.88□□□□□ -1.31
USP25-207ENST00000464435 NPIPB6E9PJ23 425 aa6.87□□□□□ -1.31
USP25-207ENST00000464435 GALK1P51570 392 aa6.87□□□□□ -1.31
USP25-207ENST00000464435 LINC00310P59036 64 aa6.87□□□□□ -1.31
USP25-207ENST00000464435 SRSF3P84103 164 aaKnown RBP6.87□□□□□ -1.31
USP25-207ENST00000464435 AMPD2Q01433 879 aa6.87□□□□□ -1.31
USP25-207ENST00000464435 HOMER1Q86YM7 354 aa6.87□□□□□ -1.31
USP25-207ENST00000464435 LRRC47Q8N1G4 583 aaKnown RBP6.87□□□□□ -1.31
USP25-207ENST00000464435 ZBTB38Q8NAP3 1195 aaPredicted RBP6.87□□□□□ -1.31
USP25-207ENST00000464435 GCM1Q9NP62 436 aa6.87□□□□□ -1.31
USP25-207ENST00000464435 PDLIM7Q9NR12 457 aa6.87□□□□□ -1.31
USP25-207ENST00000464435 CGGBP1Q9UFW8 167 aaPredicted RBP6.87□□□□□ -1.31
USP25-207ENST00000464435 SUGT1Q9Y2Z0 365 aa6.87□□□□□ -1.31
USP25-207ENST00000464435 IQCA1LA6NCM1 817 aa6.86□□□□□ -1.31
USP25-207ENST00000464435 AGRPO00253 132 aa6.86□□□□□ -1.31
USP25-207ENST00000464435 SRGAP3O43295 1099 aa6.86□□□□□ -1.31
USP25-207ENST00000464435 L1CAMP32004 1257 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms