RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ASCC2Q9H1I8 757 aaPredicted RBP5.14□□□□□ -1.59
RFC4-211ENST00000460408 EPN3Q9H201 632 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 APEX2Q9UBZ4 518 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 ZNF451Q9Y4E5 1061 aa5.14□□□□□ -1.59
RFC4-211ENST00000460408 TLDC2A0PJX2 215 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 SMARCA5O60264 1052 aaPredicted RBP5.13□□□□□ -1.59
RFC4-211ENST00000460408 DIAPH1O60610 1272 aaKnown RBP5.13□□□□□ -1.59
RFC4-211ENST00000460408 CAPNS1P04632 268 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 SDHBP21912 280 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 SPATS1Q496A3 300 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 MTERF2Q49AM1 385 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 HEATR6Q6AI08 1181 aaKnown RBP5.13□□□□□ -1.59
RFC4-211ENST00000460408 FRMD5Q7Z6J6 570 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 LILRB2Q8N423 598 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 ZNF655Q8N720 491 aaPredicted RBP5.13□□□□□ -1.59
RFC4-211ENST00000460408 LINC01356Q8N9X3 169 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 LINC00116Q8NCU8 138 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 TCTN2Q96GX1 697 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 RNPC3Q96LT9 517 aaKnown RBP5.13□□□□□ -1.59
RFC4-211ENST00000460408 PLCD4Q9BRC7 762 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 FOXP3Q9BZS1 431 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 PRDM14Q9GZV8 571 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 GP6Q9HCN6 339 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 PRR13Q9NZ81 148 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 TCFL5Q9UL49 500 aa5.13□□□□□ -1.59
RFC4-211ENST00000460408 MRPL42Q9Y6G3 142 aaKnown RBP5.13□□□□□ -1.59
RFC4-211ENST00000460408 PCBP3P57721 371 aaKnown RBP5.12□□□□□ -1.59
RFC4-211ENST00000460408 ZNF445P59923 1031 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 IFRD2Q12894 506 aaPredicted RBP5.12□□□□□ -1.59
RFC4-211ENST00000460408 TMC3Q7Z5M5 1100 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 LDHDQ86WU2 507 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 IGDCC3Q8IVU1 814 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 ADAM7Q9H2U9 754 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 KANSL2Q9H9L4 492 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 WHRNQ9P202 907 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 KLHL14Q9P2G3 628 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 PCDHB12Q9Y5F1 795 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 CADPSQ9ULU8 1353 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 SHROOM4Q9ULL8 1493 aa5.12□□□□□ -1.59
RFC4-211ENST00000460408 A0A087WZG4 1122 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 ADCY3O60266 1144 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 MPOP05164 745 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 NAT2P11245 290 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 RTP1P59025 263 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 CHMP4BP1P59074 171 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 CAP1Q01518 475 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 TP53I13Q8NBR0 393 aaPredicted RBP5.11□□□□□ -1.59
RFC4-211ENST00000460408 SGSM3Q96HU1 749 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 RCC1LQ96I51 464 aaKnown RBP5.11□□□□□ -1.59
RFC4-211ENST00000460408 FGD4Q96M96 766 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 TMPRSS5Q9H3S3 457 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 TNFRSF10DQ9UBN6 386 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 TMA7Q9Y2S6 64 aaKnown RBP5.11□□□□□ -1.59
RFC4-211ENST00000460408 FHOD1Q9Y613 1164 aa5.11□□□□□ -1.59
RFC4-211ENST00000460408 A0A1W2PQU0 124 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 SSU72P8A0A1W2PR75 194 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 FADS2P1A8MWK0 482 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 SIGLEC6O43699 453 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 ITGA4P13612 1032 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 SSRP1Q08945 709 aaKnown RBP5.1□□□□□ -1.59
RFC4-211ENST00000460408 TMEM62Q0P6H9 643 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 LAPTM5Q13571 262 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 TCEAL1Q15170 157 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 ZXDCQ2QGD7 858 aaPredicted RBP5.1□□□□□ -1.59
RFC4-211ENST00000460408 SV2CQ496J9 727 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 C2orf27AQ580R0 203 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 GALNT18Q6P9A2 607 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 ZNF227Q86WZ6 799 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 ARHGEF39Q8N4T4 335 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 KDM2BQ8NHM5 1336 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 SH3TC2Q8TF17 1288 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 THAP3Q8WTV1 239 aaPredicted RBP5.1□□□□□ -1.59
RFC4-211ENST00000460408 FCRL2Q96LA5 508 aaPredicted RBP5.1□□□□□ -1.59
RFC4-211ENST00000460408 MRGPRX3Q96LB0 322 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 PWWP2AQ96N64 755 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 APBA2Q99767 749 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 SPATA9Q9BWV2 254 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 LGR4Q9BXB1 951 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 GBP3Q9H0R5 595 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 GFOD1Q9NXC2 390 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 PFDN2Q9UHV9 154 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 FBXL21Q9UKT6 434 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 PCDHA5Q9Y5H7 936 aa5.1□□□□□ -1.59
RFC4-211ENST00000460408 WTIPA6NIX2 430 aaPredicted RBP5.09□□□□□ -1.59
RFC4-211ENST00000460408 ENPP3O14638 875 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 TBX1O43435 398 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 PPM1BO75688 479 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 PRAMEF1O95521 474 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 ITGAVP06756 1048 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 SYPP08247 313 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 CTSKP43235 329 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 PLP2Q04941 152 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 SQSTM1Q13501 440 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 CBX2Q14781 532 aaPredicted RBP5.09□□□□□ -1.59
RFC4-211ENST00000460408 HSF5Q4G112 596 aaPredicted RBP5.09□□□□□ -1.59
RFC4-211ENST00000460408 SDE2Q6IQ49 451 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 ZPBP2Q6X784 338 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 TMC6Q7Z403 805 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 ADAT2Q7Z6V5 191 aaKnown RBP5.09□□□□□ -1.59
RFC4-211ENST00000460408 LRRC47Q8N1G4 583 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms