RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PANX2Q96RD6 677 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 DCP1AQ9NPI6 582 aaPredicted RBP9.25□□□□□ -0.93
SNX13-201ENST00000409076 DISC1Q9NRI5 854 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 RMND1Q9NWS8 449 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 SPATA31A3Q5VYP0 1347 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 EBAG9O00559 213 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 KCNK3O14649 394 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 STAT3P40763 770 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 SLC1A4P43007 532 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 HERVK_113P62684 666 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 KRT83P78385 493 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 TBX2Q13207 712 aaPredicted RBP9.25□□□□□ -0.93
SNX13-201ENST00000409076 CEP85LQ5SZL2 805 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 ZNF658Q5TYW1 1059 aaPredicted RBP9.25□□□□□ -0.93
SNX13-201ENST00000409076 SRLQ86TD4 932 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 MGARPQ8TDB4 240 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 ARL8AQ96BM9 186 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 ALS2CR12Q96Q35 445 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 C1orf167Q5SNV9 1468 aa9.25□□□□□ -0.93
SNX13-201ENST00000409076 MYH10P35580 1976 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 ACTN1P12814 892 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 IFFO1Q0D2I5 559 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 CFAP58Q5T655 872 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 TBC1D5Q92609 795 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 C8orf37Q96NL8 207 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 SELENOSQ9BQE4 189 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 PHF20Q9BVI0 1012 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 PCDHB13Q9Y5F0 798 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 AFDNP55196 1824 aaKnown RBP9.24□□□□□ -0.93
SNX13-201ENST00000409076 E7EVH7 732 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 LRRC31Q6UY01 552 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 KIRREL3Q8IZU9 778 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 THOC1Q96FV9 657 aaKnown RBP9.24□□□□□ -0.93
SNX13-201ENST00000409076 FAM84BQ96KN1 310 aaPredicted RBP9.24□□□□□ -0.93
SNX13-201ENST00000409076 MLXIPLQ9NP71 852 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 REXO2Q9Y3B8 237 aaKnown RBP9.24□□□□□ -0.93
SNX13-201ENST00000409076 UBR1Q8IWV7 1749 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 ZNF76P36508 570 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 KIF11P52732 1056 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 ITPK1Q13572 414 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 E2F5Q15329 346 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 ARHGAP44Q17R89 818 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 TICAM2Q86XR7 235 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 SPICE1Q8N0Z3 855 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 IKZF4Q9H2S9 585 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 RGPD5Q99666 1765 aa9.24□□□□□ -0.93
SNX13-201ENST00000409076 RIC1Q4ADV7 1423 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 GOLGA6L10A6NI86 522 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 E9PMD0 336 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 HEXIM1O94992 359 aaKnown RBP9.23□□□□□ -0.93
SNX13-201ENST00000409076 SSR1P43307 286 aaKnown RBP9.23□□□□□ -0.93
SNX13-201ENST00000409076 SLCO1A2P46721 670 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 VPS41P49754 854 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 RPS8P62241 208 aaKnown RBP9.23□□□□□ -0.93
SNX13-201ENST00000409076 TROAPQ12815 778 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 NKX1-1Q15270 411 aaPredicted RBP9.23□□□□□ -0.93
SNX13-201ENST00000409076 DOK7Q18PE1 504 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 WHAMMP3Q1A5X7 153 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 SV2BQ7L1I2 683 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 TAB3Q8N5C8 712 aaPredicted RBP9.23□□□□□ -0.93
SNX13-201ENST00000409076 EYA3Q99504 573 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 PACSIN1Q9BY11 444 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 MINPP1Q9UNW1 487 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 RGPD1P0DJD0 1748 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 POTEB2H3BUK9 544 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 PRPF3O43395 683 aaKnown RBP9.23□□□□□ -0.93
SNX13-201ENST00000409076 UFL1O94874 794 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 KRT13P13646 458 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 ARHGAP25P42331 645 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 SP4Q02446 784 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 ACTN3Q08043 901 aaPredicted RBP9.23□□□□□ -0.93
SNX13-201ENST00000409076 CALCRLQ16602 461 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 KIAA0753Q2KHM9 967 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 TBC1D9BQ66K14 1250 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 TTBK2Q6IQ55 1244 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 NUDT12Q9BQG2 462 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 CAPS2Q9BXY5 557 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.23□□□□□ -0.939e-7■■■□□ 17.8
SNX13-201ENST00000409076 L1RE1Q9UN81 338 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 CNTNAP5Q8WYK1 1306 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L15C9J2P7 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L13C9JLJ4 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L11C9JVI0 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L18D6R9N7 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L22D6RA61 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L17D6RBQ6 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L19D6RCP7 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L20D6RJB6 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 IFNAR2P48551 515 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 CARSP49589 748 aaKnown RBP9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L24Q0WX57 530 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 IFT88Q13099 833 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 USP17L6PQ6QN14 398 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 TRIML1Q8N9V2 468 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 P2RX5Q93086 422 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 EXOC4Q96A65 974 aa9.23□□□□□ -0.93
SNX13-201ENST00000409076 RWDD2AQ9UIY3 292 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms