RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 SPATA1Q5VX52 437 aa13.83□□□□□ -0.19
CLIP4-203ENST00000401617 FBXO11Q86XK2 927 aa13.83□□□□□ -0.19
CLIP4-203ENST00000401617 DPF2Q92785 391 aa13.83□□□□□ -0.19
CLIP4-203ENST00000401617 GOPCQ9HD26 462 aa13.83□□□□□ -0.19
CLIP4-203ENST00000401617 RMND1Q9NWS8 449 aa13.83□□□□□ -0.19
CLIP4-203ENST00000401617 PRR12Q9ULL5 1215 aa13.83□□□□□ -0.19
CLIP4-203ENST00000401617 USP17L15C9J2P7 530 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 USP17L13C9JLJ4 530 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 USP17L11C9JVI0 530 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 USP17L18D6R9N7 530 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 USP17L22D6RA61 530 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 USP17L17D6RBQ6 530 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 USP17L19D6RCP7 530 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 USP17L20D6RJB6 530 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 FZD9O00144 591 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 KLRC4O43908 158 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 RPN1P04843 607 aaKnown RBP13.83□□□□□ -0.2
CLIP4-203ENST00000401617 UBASH3AP57075 661 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 USP17L24Q0WX57 530 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 ZNF658Q5TYW1 1059 aaPredicted RBP13.83□□□□□ -0.2
CLIP4-203ENST00000401617 USP17L6PQ6QN14 398 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 MOXD1Q6UVY6 613 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.83□□□□□ -0.2
CLIP4-203ENST00000401617 TEPSINQ96N21 525 aa13.83□□□□□ -0.2
CLIP4-203ENST00000401617 PHF20L1A8MW92 1017 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 TXKP42681 527 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 PRELPP51888 382 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 DHX8Q14562 1220 aaKnown RBP13.82□□□□□ -0.2
CLIP4-203ENST00000401617 TRMT44Q8IYL2 757 aaKnown RBP13.82□□□□□ -0.2
CLIP4-203ENST00000401617 HAS1Q92839 578 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 NAP1L5Q96NT1 182 aaPredicted RBP13.82□□□□□ -0.2
CLIP4-203ENST00000401617 ANO3Q9BYT9 981 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 VCPKMTQ9H867 229 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 BCS1LQ9Y276 419 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 OPLAHO14841 1288 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 SERPINC1P01008 464 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 STAT2P52630 851 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 ARID5BQ14865 1188 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 TMEM266Q2M3C6 531 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 CDKAL1Q5VV42 579 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 P2RX7Q99572 595 aaKnown RBP13.82□□□□□ -0.2
CLIP4-203ENST00000401617 C7orf25Q9BPX7 421 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 INTS13Q9NVM9 706 aa13.82□□□□□ -0.2
CLIP4-203ENST00000401617 DDX25Q9UHL0 483 aaKnown RBP13.82□□□□□ -0.2
CLIP4-203ENST00000401617 RHOBTB3O94955 611 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 EGFRP00533 1210 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 FOSP01100 380 aaPredicted RBP13.81□□□□□ -0.2
CLIP4-203ENST00000401617 ASNSP08243 561 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 GRB10Q13322 594 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 RASA3Q14644 834 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 FILIP1Q7Z7B0 1213 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 VSTM4Q8IW00 320 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 SMYD4Q8IYR2 804 aaPredicted RBP13.81□□□□□ -0.2
CLIP4-203ENST00000401617 SPICE1Q8N0Z3 855 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 C17orf53Q8N3J3 647 aaPredicted RBP13.81□□□□□ -0.2
CLIP4-203ENST00000401617 RAB34Q9BZG1 259 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 SH2D4AQ9H788 454 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 SAMSN1Q9NSI8 373 aaKnown RBP13.81□□□□□ -0.2
CLIP4-203ENST00000401617 LRWD1Q9UFC0 647 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 SYNRGQ9UMZ2 1314 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 DICER1Q9UPY3 1922 aaKnown RBP13.81□□□□□ -0.2
CLIP4-203ENST00000401617 PIK3CDO00329 1044 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 SNAP25P60880 206 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 CCZ1BP86790 482 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
CLIP4-203ENST00000401617 TRAF1Q13077 416 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 TNFAIP1Q13829 316 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 APTXQ7Z2E3 356 aaKnown RBP13.81□□□□□ -0.2
CLIP4-203ENST00000401617 TMC6Q7Z403 805 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 RASSF8Q8NHQ8 419 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 CALML4Q96GE6 196 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 PNMA5Q96PV4 448 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 RANBP17Q9H2T7 1088 aaKnown RBP13.81□□□□□ -0.2
CLIP4-203ENST00000401617 KCNMB3Q9NPA1 279 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 GINM1Q9NU53 330 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 BLOC1S4Q9NUP1 217 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 PPP1R1BQ9UD71 204 aaPredicted RBP13.81□□□□□ -0.2
CLIP4-203ENST00000401617 STK17AQ9UEE5 414 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 RWDD2AQ9UIY3 292 aa13.81□□□□□ -0.2
CLIP4-203ENST00000401617 GMPSP49915 693 aaPredicted RBP13.8□□□□□ -0.2
CLIP4-203ENST00000401617 IKQ13123 557 aaPredicted RBP13.8□□□□□ -0.2
CLIP4-203ENST00000401617 FAM83BQ5T0W9 1011 aa13.8□□□□□ -0.2
CLIP4-203ENST00000401617 CCDC150Q8NCX0 1101 aa13.8□□□□□ -0.2
CLIP4-203ENST00000401617 CHURC1Q8WUH1 139 aa13.8□□□□□ -0.2
CLIP4-203ENST00000401617 PLIN2Q99541 437 aa13.8□□□□□ -0.2
CLIP4-203ENST00000401617 TRIM9Q9C026 710 aa13.8□□□□□ -0.2
CLIP4-203ENST00000401617 SLC26A4O43511 780 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 SREBF1P36956 1147 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 RASSF7Q02833 373 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 NR1I3Q14994 352 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 KMT5BQ4FZB7 885 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 TMEM119Q4V9L6 283 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 KLHL10Q6JEL2 608 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 ARMCX5Q6P1M9 558 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 CNNM4Q6P4Q7 775 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 FAM160B2Q86V87 743 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 ADSSL1Q8N142 457 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 A0A1B0GTH6 734 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 CIITAP33076 1130 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms