RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 DNAJC21Q5F1R6 531 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 PACS2Q86VP3 889 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 BLIDQ8IZY5 108 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 GOLGA6L1Q8N7Z2 621 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 MLKLQ8NB16 471 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 LARP6Q9BRS8 491 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 LRRC2Q9BYS8 371 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 ZCCHC17Q9NP64 241 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 ADAM21Q9UKJ8 722 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 ADAMTS5Q9UNA0 930 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 RPTORQ8N122 1335 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 ITIH6Q6UXX5 1313 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 GOLGA6L19H0YKK7 550 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 ATP2A1O14983 1001 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 PEX14O75381 377 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 SEC31AO94979 1220 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 ZNF202O95125 648 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 ATP2B1P20020 1258 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 GNA11P29992 359 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 PTGER2P43116 358 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 USP5P45974 858 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 SF3A1Q15459 793 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 NFIL3Q16649 462 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 FAM182BQ5T319 152 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 SUGP1Q8IWZ8 645 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 UBXN4Q92575 508 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 NAT10Q9H0A0 1025 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 HOOK1Q9UJC3 728 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 ZBTB12Q9Y330 459 aaPredicted RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 TRIM75PA6NK02 468 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 FANCGO15287 622 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 PLEKHA8P1O95397 391 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 CPP00450 1065 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 HLA-DOAP06340 250 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 IVLP07476 585 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 CYP2D6P10635 497 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 NDUFA8P51970 172 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 ETF1P62495 437 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 DPYDQ12882 1025 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 CCDC96Q2M329 555 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 SWT1Q5T5J6 900 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 TRIM65Q6PJ69 517 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 CCDC73Q6ZRK6 1079 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 ZNF444Q8N0Y2 327 aaPredicted RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 MSL3Q8N5Y2 521 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 ENOX1Q8TC92 643 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 TGFBRAP1Q8WUH2 860 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 VTI1AQ96AJ9 217 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 MRRFQ96E11 262 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 SLC26A6Q9BXS9 759 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 FUT8Q9BYC5 575 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 TMX4Q9H1E5 349 aaPredicted RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 PLSCR2Q9NRY7 297 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 KBTBD4Q9NVX7 518 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 TMX2Q9Y320 296 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 PHF20L1A8MW92 1017 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 PARP1P09874 1014 aaKnown RBP6.03□□□□□ -1.44
VPS41-203ENST00000395969 TSPY3P0CV98 308 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 TSPY8P0CW00 308 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 GSCP56915 257 aaPredicted RBP6.03□□□□□ -1.44
VPS41-203ENST00000395969 STK3Q13188 491 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 TMEM119Q4V9L6 283 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 NOM1Q5C9Z4 860 aaKnown RBP6.03□□□□□ -1.44
VPS41-203ENST00000395969 WWC2Q6AWC2 1192 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 B3GNT9Q6UX72 402 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 NFXL1Q6ZNB6 911 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 CHST3Q7LGC8 479 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 CCDC150Q8NCX0 1101 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 IQCDQ96DY2 449 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 CEP95Q96GE4 821 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 PLCD4Q9BRC7 762 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 WDR18Q9BV38 432 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 RANBP17Q9H2T7 1088 aaKnown RBP6.03□□□□□ -1.44
VPS41-203ENST00000395969 DNAI1Q9UI46 699 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 COL11A1P12107 1806 aaPredicted RBP6.03□□□□□ -1.44
VPS41-203ENST00000395969 FRMD3A2A2Y4 597 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 TSPY2A6NKD2 308 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 MAP2K7O14733 419 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 OAZ1P54368 228 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 DIXDC1Q155Q3 683 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 TTC31Q49AM3 519 aaPredicted RBP6.03□□□□□ -1.44
VPS41-203ENST00000395969 ARMCX5Q6P1M9 558 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 FAM173BQ6P4H8 233 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 FAM43BQ6ZT52 329 aaPredicted RBP6.03□□□□□ -1.44
VPS41-203ENST00000395969 SMIM5Q71RC9 77 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 FCHSD1Q86WN1 690 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 MICU3Q86XE3 530 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 GPR161Q8N6U8 529 aaKnown RBP6.03□□□□□ -1.44
VPS41-203ENST00000395969 HOOK2Q96ED9 719 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 C7orf25Q9BPX7 421 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 INCENPQ9NQS7 918 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 STK17AQ9UEE5 414 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 DACH1Q9UI36 760 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 TTF2Q9UNY4 1162 aaKnown RBP6.03□□□□□ -1.44
VPS41-203ENST00000395969 DAAM1Q9Y4D1 1078 aa6.03□□□□□ -1.44
VPS41-203ENST00000395969 BTBD18B2RXH4 712 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 BCRP11274 1271 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 PBX1P40424 430 aa6.02□□□□□ -1.45
VPS41-203ENST00000395969 MLLT3P42568 568 aaPredicted RBP6.02□□□□□ -1.45
VPS41-203ENST00000395969 GTF2IP78347 998 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms