RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 JAG1P78504 1218 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 E4F1Q66K89 784 aaPredicted RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 TMEM139Q8IV31 216 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 AOPEPQ8N6M6 819 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 C8orf76Q96K31 380 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 KIAA1683Q9H0B3 1180 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 GOLGA6L4A6NEF3 574 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 ADM5C9JUS6 153 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 ZBTB43O43298 467 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 ITGBL1O95965 494 aaPredicted RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 ZSCAN20P17040 1043 aaPredicted RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 IREB2P48200 963 aaKnown RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 GNAQP50148 359 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 TOB1P50616 345 aaPredicted RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 ASPRV1Q53RT3 343 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 RRP12Q5JTH9 1297 aaKnown RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 CCAR2Q8N163 923 aaKnown RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 RBM46Q8TBY0 533 aaKnown RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 KAT14Q9H8E8 782 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 AS3MTQ9HBK9 375 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 ARHGEF10LQ9HCE6 1279 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 INTS13Q9NVM9 706 aa8.81□□□□□ -1
CDKL5-202ENST00000379996 ORC3Q9UBD5 711 aaPredicted RBP8.81□□□□□ -1
CDKL5-202ENST00000379996 CDKL5O76039 1030 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 ZNF202O95125 648 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 FOSBP53539 338 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 FUT2Q10981 343 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 BTNL9Q6UXG8 535 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 PNMA1Q8ND90 353 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 LPAR1Q92633 364 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 MAF1Q9H063 256 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 METRNQ9UJH8 293 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 SPDYE5A6NIY4 337 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 USP17L5A8MUK1 530 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 IFNAR1P17181 557 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 KIF5BP33176 963 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 ME1P48163 572 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 ICA1Q05084 483 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 SYNE3Q6ZMZ3 975 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 CCDC73Q6ZRK6 1079 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 STK11IPQ8N1F8 1099 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 FANCBQ8NB91 859 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 SPATA20Q8TB22 786 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 MTMR8Q96EF0 704 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 HHIPL1Q96JK4 782 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 SPZ1Q9BXG8 430 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 L2HGDHQ9H9P8 463 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 MAD2L2Q9UI95 211 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 PAXBP1Q9Y5B6 917 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 C19orf81C9J6K1 198 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 PPP1R12BO60237 982 aaPredicted RBP8.8□□□□□ -1
CDKL5-202ENST00000379996 NMT2O60551 498 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 KINO60870 393 aaKnown RBP8.8□□□□□ -1
CDKL5-202ENST00000379996 FMNL1O95466 1100 aaPredicted RBP8.8□□□□□ -1
CDKL5-202ENST00000379996 GH2P01242 217 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 PTPRAP18433 802 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 METAP2P50579 478 aaKnown RBP eCLIP8.8□□□□□ -1
CDKL5-202ENST00000379996 GPATCH4Q5T3I0 446 aaKnown RBP8.8□□□□□ -1
CDKL5-202ENST00000379996 ANKRD13AQ8IZ07 590 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 TOMM22Q9NS69 142 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 KCNH4Q9UQ05 1017 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 SNCAIPQ9Y6H5 919 aa8.8□□□□□ -1
CDKL5-202ENST00000379996 GOLGB1Q14789 3259 aaKnown RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 hCG_1984214I3L0E3 225 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 PDHBP11177 359 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 EEF2P13639 858 aaKnown RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 SARSP49591 514 aaKnown RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 USP14P54578 494 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 PPATQ06203 517 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 FSTL1Q12841 308 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 TMTC3Q6ZXV5 915 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 ARMC9Q7Z3E5 817 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 CEP57L1Q8IYX8 460 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 ZNF713Q8N859 430 aaPredicted RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 PTCD2Q8WV60 388 aaKnown RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 MED15Q96RN5 788 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 RNF26Q9BY78 433 aaPredicted RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 NMRK2Q9NPI5 230 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 AFG3L2Q9Y4W6 797 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 TBX2Q13207 712 aaPredicted RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 SEPT2Q15019 361 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 KRT40Q6A162 431 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 ASTLQ6HA08 431 aaPredicted RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 C16orf45Q96MC5 204 aaPredicted RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 TSKSQ9UJT2 592 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 FGD1P98174 961 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 RTN1Q16799 776 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 ZKSCAN3Q9BRR0 538 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 GLIS2Q9BZE0 524 aaPredicted RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 XPO4Q9C0E2 1151 aaKnown RBP8.79□□□□□ -1
CDKL5-202ENST00000379996 RIOX1Q9H6W3 641 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 VCPKMTQ9H867 229 aa8.79□□□□□ -1
CDKL5-202ENST00000379996 MYPNQ86TC9 1320 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 PRPF3O43395 683 aaKnown RBP8.78□□□□□ -1
CDKL5-202ENST00000379996 TNNT1P13805 278 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 ZNF543Q08ER8 600 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 PPIL2Q13356 520 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 SF3A1Q15459 793 aaKnown RBP8.78□□□□□ -1
CDKL5-202ENST00000379996 EAPPQ56P03 285 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms