RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 TM6SF1Q9BZW5 370 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 FBXO28Q9NVF7 368 aa7.6□□□□□ -1.19
DEPDC4-201ENST00000299185 FAM155AB1AL88 458 aaPredicted RBP7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 JAK2O60674 1132 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 TTLL1O95922 423 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 ASNSP08243 561 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 TOP1P11387 765 aaKnown RBP7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 VCAM1P19320 739 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 PSMA5P28066 241 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 CDC27P30260 824 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 SLC16A2P36021 539 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 ZNF157P51786 506 aaPredicted RBP7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 PPIL2Q13356 520 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 MOGSQ13724 837 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 ME3Q16798 604 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 SLFN13Q68D06 897 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 APOA5Q6Q788 366 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 USP17L2Q6R6M4 530 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 NBPF11Q86T75 865 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 CCDC83Q8IWF9 413 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 CCDC155Q8N6L0 562 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 PNMA1Q8ND90 353 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 BRI3BPQ8WY22 251 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 HOOK2Q96ED9 719 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 KAT14Q9H8E8 782 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 MAP10Q9P2G4 905 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 THSD7BQ9C0I4 1608 aa7.59□□□□□ -1.19
DEPDC4-201ENST00000299185 WDR19Q8NEZ3 1342 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 ZSWIM8A7E2V4 1837 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 CCL15-CCL14A0A0B4J2E2 113 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 CCDC69A6NI79 296 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 FOXN1O15353 648 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 PDHBP11177 359 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 PCP11498 1178 aaKnown RBP7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 NOVP48745 357 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 CTCFP49711 727 aaPredicted RBP7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 GRM4Q14833 912 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 CCL15Q16663 113 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 RNFT1Q5M7Z0 435 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 RGMBQ6NW40 437 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 IQCA1Q86XH1 822 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 ERO1BQ86YB8 467 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 ZNF280CQ8ND82 737 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 ARMC2Q8NEN0 867 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 WHAMMQ8TF30 809 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 SLC10A4Q96EP9 437 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 TMEM87BQ96K49 555 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 CAPNS2Q96L46 248 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 TBC1D2Q9BYX2 928 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 UBA5Q9GZZ9 404 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 RPAP3Q9H6T3 665 aaPredicted RBP7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 VCPKMTQ9H867 229 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 KANSL2Q9H9L4 492 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 ZNF287Q9HBT7 754 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 SLC24A3Q9HC58 644 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 ARHGEF10LQ9HCE6 1279 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 TCP11L1Q9NUJ3 509 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 NYAP2Q9P242 653 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 MAP4K5Q9Y4K4 846 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 AFG3L2Q9Y4W6 797 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 A0A0G2JMZ2 1700 aa7.58□□□□□ -1.2
DEPDC4-201ENST00000299185 CNTNAP5Q8WYK1 1306 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 A0A0G2JLL6 359 aaPredicted RBP7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 ERICH2A1L162 156 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 CCDC85CA6NKD9 419 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 FIGNL2A6NMB9 653 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 F5H6K3 240 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 IGF2BP3O00425 579 aaKnown RBP eCLIP7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 PDIA3P30101 505 aaKnown RBP7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 FKBP1BP68106 108 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 KLRC3Q07444 240 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 SCRN1Q12765 414 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 RTN1Q16799 776 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 XP32Q5T750 250 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 SV2AQ7L0J3 742 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 PRRT2Q7Z6L0 340 aaPredicted RBP7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 SGMS1Q86VZ5 419 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 FAM43AQ8N2R8 423 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 CCDC82Q8N4S0 544 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 PHKBQ93100 1093 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 ATG4CQ96DT6 458 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 AIFM3Q96NN9 605 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 WDR18Q9BV38 432 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 AGXT2Q9BYV1 514 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 TANGO6Q9C0B7 1094 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 R3HDMLQ9H3Y0 253 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 KCNH4Q9UQ05 1017 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 TMX2Q9Y320 296 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 RBM19Q9Y4C8 960 aaKnown RBP7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 SLC12A7Q9Y666 1083 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 PARP14Q460N5 1801 aa7.57□□□□□ -1.2
DEPDC4-201ENST00000299185 BTBD19C9JJ37 291 aa7.56□□□□□ -1.2
DEPDC4-201ENST00000299185 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
DEPDC4-201ENST00000299185 TMEM232C9JQI7 657 aa7.56□□□□□ -1.2
DEPDC4-201ENST00000299185 CFAP99D6REC4 459 aa7.56□□□□□ -1.2
DEPDC4-201ENST00000299185 ADAMTS3O15072 1205 aa7.56□□□□□ -1.2
DEPDC4-201ENST00000299185 ZBTB43O43298 467 aa7.56□□□□□ -1.2
DEPDC4-201ENST00000299185 CYTH3O43739 400 aa7.56□□□□□ -1.2
DEPDC4-201ENST00000299185 DDAH1O94760 285 aa7.56□□□□□ -1.2
DEPDC4-201ENST00000299185 CTDNEP1O95476 244 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms