RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PIGBQ92521 554 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 PALLDQ8WX93 1383 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 SLC16A2P36021 539 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 KRBA2Q6ZNG9 492 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 TRIM58Q8NG06 486 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 KRT12Q99456 494 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 SEPT10Q9P0V9 454 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 SAMD9Q5K651 1589 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 ZNF335Q9H4Z2 1342 aaPredicted RBP20.75■□□□□ 0.91
SMPD3-201ENST00000219334 ARHGEF37A1IGU5 675 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 POLR2FP61218 127 aaKnown RBP20.74■□□□□ 0.91
SMPD3-201ENST00000219334 SYDE2Q5VT97 1194 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 MIGA2Q7L4E1 593 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 CEP57Q86XR8 500 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 NT5C1BQ96P26 610 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 SYNJ2BP-COX16A0A087WUM0 186 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 GAP43P17677 238 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 PPP2R5EQ16537 467 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 SYMPKQ92797 1274 aaKnown RBP20.74■□□□□ 0.91
SMPD3-201ENST00000219334 CEP170P1Q96L14 293 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 XPO4Q9C0E2 1151 aaKnown RBP20.74■□□□□ 0.91
SMPD3-201ENST00000219334 CUEDC2Q9H467 287 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 COX16Q9P0S2 106 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 BRD1O95696 1058 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 FAM160B2Q86V87 743 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 FOXP4Q8IVH2 680 aaPredicted RBP20.74■□□□□ 0.91
SMPD3-201ENST00000219334 MAP7D3Q8IWC1 876 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 PLCB1Q9NQ66 1216 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 RIPOR2Q9Y4F9 1068 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 CFAP65Q6ZU64 1925 aaKnown RBP20.74■□□□□ 0.91
SMPD3-201ENST00000219334 HEG1Q9ULI3 1381 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 A6NJR5 290 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 KMT5AQ9NQR1 393 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 CEP85LQ5SZL2 805 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 CCDC62Q6P9F0 684 aa20.74■□□□□ 0.91
SMPD3-201ENST00000219334 RPUSD2Q8IZ73 545 aaKnown RBP20.74■□□□□ 0.91
SMPD3-201ENST00000219334 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.74■□□□□ 0.91
SMPD3-201ENST00000219334 A6NNZ2 444 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 GSPT1P15170 499 aaKnown RBP20.73■□□□□ 0.91
SMPD3-201ENST00000219334 ADD2P35612 726 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 MFAP3P55082 362 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 TUBB8Q3ZCM7 444 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 CACTINQ8WUQ7 758 aaKnown RBP20.73■□□□□ 0.91
SMPD3-201ENST00000219334 SNX25Q9H3E2 840 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 DENND2CQ68D51 928 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 C2orf69Q8N8R5 385 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 LARP4BQ92615 738 aaKnown RBP20.73■□□□□ 0.91
SMPD3-201ENST00000219334 H2AFZP0C0S5 128 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 H2AFVQ71UI9 128 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 GOLGA8CPA6NN73 597 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 PHBP35232 272 aa20.73■□□□□ 0.91
SMPD3-201ENST00000219334 ADKP55263 362 aaKnown RBP20.73■□□□□ 0.91
SMPD3-201ENST00000219334 RPS6KA2Q15349 733 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 EXOC3L4Q17RC7 722 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 ABCD1P33897 745 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 CLEC4GQ6UXB4 293 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 EEPD1Q7L9B9 569 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 FBXO18Q8NFZ0 1043 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 NLRP7Q8WX94 980 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 AK8Q96MA6 479 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 RPS6KA4O75676 772 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 ADCY8P40145 1251 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 MYL7Q01449 175 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 VSIG1Q86XK7 387 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 KCNK3O14649 394 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 C21orf2O43822 256 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 FMNL1O95466 1100 aaPredicted RBP20.72■□□□□ 0.91
SMPD3-201ENST00000219334 USP17L8P0C7I0 530 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 ZNF131P52739 623 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 APOA5Q6Q788 366 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 ACCSQ96QU6 501 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 PIGSQ96S52 555 aa20.72■□□□□ 0.91
SMPD3-201ENST00000219334 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 MYCP01106 439 aaPredicted RBP20.71■□□□□ 0.91
SMPD3-201ENST00000219334 PSMD6Q15008 389 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 RINT1Q6NUQ1 792 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 PCDHB4Q9Y5E5 795 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 B4GALNT4Q76KP1 1039 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 MAP4K1Q92918 833 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 FOXP1Q9H334 677 aaPredicted RBP20.71■□□□□ 0.91
SMPD3-201ENST00000219334 SAR1BQ9Y6B6 198 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 USP6P35125 1406 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 MCUR1Q96AQ8 359 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 RPGRIP1Q96KN7 1286 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 CLIC6Q96NY7 704 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 IFT122Q9HBG6 1241 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 BSDC1Q9NW68 430 aaPredicted RBP20.71■□□□□ 0.91
SMPD3-201ENST00000219334 NDUFAB1O14561 156 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 FAM149B1Q96BN6 582 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 ZNF827Q17R98 1081 aa20.71■□□□□ 0.91
SMPD3-201ENST00000219334 IPO11Q9UI26 975 aaKnown RBP20.71■□□□□ 0.91
SMPD3-201ENST00000219334 BFSP1Q12934 665 aa20.7■□□□□ 0.9
SMPD3-201ENST00000219334 DIXDC1Q155Q3 683 aa20.7■□□□□ 0.9
SMPD3-201ENST00000219334 KRT71Q3SY84 523 aa20.7■□□□□ 0.9
SMPD3-201ENST00000219334 KRIT1O00522 736 aa20.7■□□□□ 0.9
SMPD3-201ENST00000219334 TLR7Q9NYK1 1049 aaKnown RBP20.7■□□□□ 0.9
SMPD3-201ENST00000219334 DDX41Q9UJV9 622 aaKnown RBP20.7■□□□□ 0.9
SMPD3-201ENST00000219334 PCDHA7Q9UN72 937 aa20.7■□□□□ 0.9
SMPD3-201ENST00000219334 SPATA1Q5VX52 437 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms