RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 UBE2SQ16763 222 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 LETM2Q2VYF4 491 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 SPECC1Q5M775 1068 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 CCDC174Q6PII3 467 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 SASS6Q6UVJ0 657 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 FAM160B2Q86V87 743 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 SCYL3Q8IZE3 742 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 ZKSCAN4Q969J2 545 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-219ENST00000641513 MTMR8Q96EF0 704 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 SDF4Q9BRK5 362 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 PSTPIP2Q9H939 334 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 AS3MTQ9HBK9 375 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 RIC8AQ9NPQ8 531 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 FBXO2Q9UK22 296 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-219ENST00000641513 PRR12Q9ULL5 1215 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 PITPNM2Q9BZ72 1349 aa10.07□□□□□ -0.8
PHGDH-219ENST00000641513 VWA3AA6NCI4 1184 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 M0R2N6 131 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 CCNT1O60563 726 aaKnown RBP10.06□□□□□ -0.8
PHGDH-219ENST00000641513 ZNF202O95125 648 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 PTPREP23469 700 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 YY1P25490 414 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 TYRO3Q06418 890 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 SNW1Q13573 536 aaKnown RBP10.06□□□□□ -0.8
PHGDH-219ENST00000641513 EAPPQ56P03 285 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-219ENST00000641513 RESP18Q5W5W9 173 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 SHC4Q6S5L8 630 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 BTNL9Q6UXG8 535 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 FMR1NBQ8N0W7 255 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-219ENST00000641513 RNF214Q8ND24 703 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 TBCKQ8TEA7 893 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 NAP1L5Q96NT1 182 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-219ENST00000641513 TANGO6Q9C0B7 1094 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 GLT8D2Q9H1C3 349 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 SPTLC3Q9NUV7 552 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 FEM1BQ9UK73 627 aa10.06□□□□□ -0.8
PHGDH-219ENST00000641513 CTDP1Q9Y5B0 961 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-219ENST00000641513 SRPRBQ9Y5M8 271 aaKnown RBP10.06□□□□□ -0.8
PHGDH-219ENST00000641513 WDR46O15213 610 aaKnown RBP10.05□□□□□ -0.8
PHGDH-219ENST00000641513 ADCY5O95622 1261 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 PTMAP06454 111 aaKnown RBP10.05□□□□□ -0.8
PHGDH-219ENST00000641513 TAL1P17542 331 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-219ENST00000641513 CDC25BP30305 580 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 EPHX2P34913 555 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 USP14P54578 494 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 ATP2C1P98194 919 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-219ENST00000641513 GRIN1Q05586 938 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 TRAF1Q13077 416 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 SPP2Q13103 211 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 MTMR2Q13614 643 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 TTLL12Q14166 644 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-219ENST00000641513 ZRSR1Q15695 479 aaKnown RBP10.05□□□□□ -0.8
PHGDH-219ENST00000641513 USP50Q70EL3 339 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-219ENST00000641513 KRT26Q7Z3Y9 468 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 NEK8Q86SG6 692 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 CSRNP2Q9H175 543 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 KCNH3Q9ULD8 1083 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 SSC5DA1L4H1 1573 aa10.05□□□□□ -0.8
PHGDH-219ENST00000641513 PAPPA2Q9BXP8 1791 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 GLTPD2A6NH11 291 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 PPP1R12BO60237 982 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-219ENST00000641513 MARCH6O60337 910 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 NEMFO60524 1076 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 PTPRAP18433 802 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 NF2P35240 595 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 DGKZQ13574 1117 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 SARM1Q6SZW1 724 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 DLK2Q6UY11 383 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 DTHD1Q6ZMT9 781 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 PDILTQ8N807 584 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 ZNF579Q8NAF0 562 aaKnown RBP10.04□□□□□ -0.8
PHGDH-219ENST00000641513 ZNF280CQ8ND82 737 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 LPAR1Q92633 364 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 KLRG1Q96E93 195 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 SLF1Q9BQI6 1058 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 KIAA1683Q9H0B3 1180 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 FBXO28Q9NVF7 368 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 ZNF112Q9UJU3 913 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 CSADQ9Y600 493 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.04□□□□□ -0.8
PHGDH-219ENST00000641513 ZHX2Q9Y6X8 837 aa10.04□□□□□ -0.8
PHGDH-219ENST00000641513 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
PHGDH-219ENST00000641513 RLFQ13129 1914 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 IQCA1LA6NCM1 817 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 POLR2DO15514 142 aaKnown RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 RRP9O43818 475 aaKnown RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 PLA2G6O60733 806 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP2O75604 605 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 FLOT1O75955 427 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms