RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 KIAA1551Q9HCM1 1747 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 NDUFA10O95299 355 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 STAT6P42226 847 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 PRCPP42785 496 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 CCDC122Q5T0U0 273 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 KIAA1328Q86T90 577 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 MTRQ99707 1265 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 CPVLQ9H3G5 476 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 FAM204AQ9H8W3 233 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 DCP1AQ9NPI6 582 aaPredicted RBP11.61□□□□□ -0.55
TP53-225ENST00000619485 MYH8P13535 1937 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 TTC26A0AVF1 554 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 RPN1P04843 607 aaKnown RBP11.61□□□□□ -0.55
TP53-225ENST00000619485 USP5P45974 858 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
TP53-225ENST00000619485 RASGRP4Q8TDF6 673 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 GBP3Q9H0R5 595 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 RSPH14Q9UHP6 348 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 RWDD2AQ9UIY3 292 aa11.61□□□□□ -0.55
TP53-225ENST00000619485 RRP15Q9Y3B9 282 aaKnown RBP11.61□□□□□ -0.55
TP53-225ENST00000619485 EPN1Q9Y6I3 576 aaPredicted RBP11.61□□□□□ -0.55
TP53-225ENST00000619485 PP2D1A8MPX8 630 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 ATP1A1P05023 1023 aaKnown RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 DCAF8Q5TAQ9 597 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 RIN2Q8WYP3 895 aaPredicted RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 TRIM47Q96LD4 638 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 GNL3LQ9NVN8 582 aaKnown RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 LIMA1Q9UHB6 759 aaKnown RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 LUC7L2Q9Y383 392 aaKnown RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 ITIH6Q6UXX5 1313 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 MACROD2A1Z1Q3 448 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 BMP15O95972 392 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 PARP1P09874 1014 aaKnown RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 ATP2C1P98194 919 aaPredicted RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 IL17AQ16552 155 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 MAPKAPK5Q8IW41 473 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 SRBD1Q8N5C6 995 aaKnown RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 GPKOWQ92917 476 aaPredicted RBP eCLIP11.6□□□□□ -0.55
TP53-225ENST00000619485 TSPYL1Q9H0U9 437 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 ACBD3Q9H3P7 528 aa11.6□□□□□ -0.55
TP53-225ENST00000619485 COL11A2P13942 1736 aaPredicted RBP11.6□□□□□ -0.55
TP53-225ENST00000619485 USP17L3A6NCW0 530 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 USP17L4A6NCW7 530 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 RNF40O75150 1001 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 TRIM21P19474 475 aaKnown RBP11.59□□□□□ -0.55
TP53-225ENST00000619485 PMS1P54277 932 aaKnown RBP11.59□□□□□ -0.55
TP53-225ENST00000619485 SPAG1Q07617 926 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 TUBB2AQ13885 445 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 SLC35G1Q2M3R5 365 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 ZNF658Q5TYW1 1059 aaPredicted RBP11.59□□□□□ -0.55
TP53-225ENST00000619485 PDXDC2PQ6P474 469 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 USP17L1Q7RTZ2 530 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 SRLQ86TD4 932 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 CLEC10AQ8IUN9 316 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 RPGRQ92834 1020 aaKnown RBP11.59□□□□□ -0.55
TP53-225ENST00000619485 DRC1Q96MC2 740 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 MMS19Q96T76 1030 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 TUBB2BQ9BVA1 445 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 JADE2Q9NQC1 790 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 MAGEC2Q9UBF1 373 aaPredicted RBP11.59□□□□□ -0.55
TP53-225ENST00000619485 REXO2Q9Y3B8 237 aaKnown RBP11.59□□□□□ -0.55
TP53-225ENST00000619485 NID2Q14112 1375 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 CDK5RAP2Q96SN8 1893 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 B4DLN1 442 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 ZNF185O15231 689 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 FUT2Q10981 343 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 TROAPQ12815 778 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 MKRN3Q13064 507 aaKnown RBP11.59□□□□□ -0.55
TP53-225ENST00000619485 E2F4Q16254 413 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 CT47A1Q5JQC4 288 aaPredicted RBP11.59□□□□□ -0.55
TP53-225ENST00000619485 OR8K1Q8NGG5 319 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 RBM28Q9NW13 759 aaKnown RBP11.59□□□□□ -0.55
TP53-225ENST00000619485 PSD3Q9NYI0 1048 aa11.59□□□□□ -0.55
TP53-225ENST00000619485 IPO7O95373 1038 aaKnown RBP11.58□□□□□ -0.56
TP53-225ENST00000619485 KLK7P49862 253 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 MRPS25P82663 173 aaKnown RBP11.58□□□□□ -0.56
TP53-225ENST00000619485 CYP27A1Q02318 531 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 TRIM14Q14142 442 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 NPY5RQ15761 445 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 SHROOM1Q2M3G4 852 aaPredicted RBP11.58□□□□□ -0.56
TP53-225ENST00000619485 TMTC3Q6ZXV5 915 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 DZIP1Q86YF9 867 aaKnown RBP11.58□□□□□ -0.56
TP53-225ENST00000619485 FAM71BQ8TC56 605 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 TGFBRAP1Q8WUH2 860 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 RABEP2Q9H5N1 569 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 RMND1Q9NWS8 449 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 MCM9Q9NXL9 1143 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 SAR1BQ9Y6B6 198 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 MYH6P13533 1939 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 APBA3O96018 575 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 SCG2P13521 617 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 AMPD2Q01433 879 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 CRY2Q49AN0 593 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 YY1AP1Q9H869 796 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 AGPAT5Q9NUQ2 364 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 MYO1AQ9UBC5 1043 aa11.58□□□□□ -0.56
TP53-225ENST00000619485 DUSP10Q9Y6W6 482 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms