RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 RGS9BPQ6ZS82 235 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 MMS19Q96T76 1030 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 ZNF229Q9UJW7 825 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 FOXO3O43524 673 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 GNA14O95837 355 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 MMS22LQ6ZRQ5 1243 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 EEF2KMTQ96G04 330 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 PAWRQ96IZ0 340 aaKnown RBP15.78■□□□□ 0.12
PTPN9-206ENST00000618819 KIAA1468Q9P260 1216 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 SLC7A5Q01650 507 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 RINT1Q6NUQ1 792 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 CFAP36Q96G28 342 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 DZIP3Q86Y13 1208 aaKnown RBP15.77■□□□□ 0.12
PTPN9-206ENST00000618819 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.77■□□□□ 0.12
PTPN9-206ENST00000618819 TMEM87BQ96K49 555 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 USP28Q96RU2 1077 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 SPZ1Q9BXG8 430 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 ALDH1L1O75891 902 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 NBPF20Q3BBV1 942 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 ANGPTL8Q6UXH0 198 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 ACSBG1Q96GR2 724 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 TRPV6Q9H1D0 765 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 HAUS4Q9H6D7 363 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 CDC23Q9UJX2 597 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 KDRP35968 1356 aa15.77■□□□□ 0.12
PTPN9-206ENST00000618819 TRIP13Q15645 432 aaPredicted RBP15.77■□□□□ 0.11
PTPN9-206ENST00000618819 ANKRD36BQ8N2N9 1353 aa15.77■□□□□ 0.11
PTPN9-206ENST00000618819 DYNC1I2Q13409 638 aaKnown RBP15.77■□□□□ 0.11
PTPN9-206ENST00000618819 FAM102BQ5T8I3 360 aa15.77■□□□□ 0.11
PTPN9-206ENST00000618819 DAAM1Q9Y4D1 1078 aa15.77■□□□□ 0.11
PTPN9-206ENST00000618819 EPN1Q9Y6I3 576 aaPredicted RBP15.77■□□□□ 0.11
PTPN9-206ENST00000618819 TOP2AP11388 1531 aaKnown RBP15.77■□□□□ 0.11
PTPN9-206ENST00000618819 GPBP1Q86WP2 473 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 ELAC2Q9BQ52 826 aaKnown RBP15.76■□□□□ 0.11
PTPN9-206ENST00000618819 MSH6P52701 1360 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 MYO1CO00159 1063 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 CARSP49589 748 aaKnown RBP15.76■□□□□ 0.11
PTPN9-206ENST00000618819 KIF11P52732 1056 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 SLC52A1Q9NWF4 448 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 BIN2Q9UBW5 565 aaPredicted RBP15.76■□□□□ 0.11
PTPN9-206ENST00000618819 IPO11Q9UI26 975 aaKnown RBP15.76■□□□□ 0.11
PTPN9-206ENST00000618819 NR1D1P20393 614 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 TRAPPC10P48553 1259 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 GLE1Q53GS7 698 aaKnown RBP15.76■□□□□ 0.11
PTPN9-206ENST00000618819 SERPINI1Q99574 410 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 OSBPL1AQ9BXW6 950 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 NSFL1CQ9UNZ2 370 aaKnown RBP15.76■□□□□ 0.11
PTPN9-206ENST00000618819 TTC21BQ7Z4L5 1316 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 CPP00450 1065 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 DHX9Q08211 1270 aaKnown RBP15.76■□□□□ 0.11
PTPN9-206ENST00000618819 ATP6V0A1Q93050 837 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 ING2Q9H160 280 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 MAGEA9P43362 315 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 PARD3BQ8TEW8 1205 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 RUNDC3BQ96NL0 473 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 NCAPD3P42695 1498 aa15.76■□□□□ 0.11
PTPN9-206ENST00000618819 PFDN6O15212 129 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 P4HA1P13674 534 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 TRIM42Q8IWZ5 723 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 FLCNQ8NFG4 579 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 CMTR1Q8N1G2 835 aaKnown RBP15.75■□□□□ 0.11
PTPN9-206ENST00000618819 FNDC3AQ9Y2H6 1198 aaKnown RBP15.75■□□□□ 0.11
PTPN9-206ENST00000618819 LMNAP02545 664 aaKnown RBP15.75■□□□□ 0.11
PTPN9-206ENST00000618819 BRD2P25440 801 aaKnown RBP15.75■□□□□ 0.11
PTPN9-206ENST00000618819 CASP14P31944 242 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 SLMAPQ14BN4 828 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 SPOPLQ6IQ16 392 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 PPM1KQ8N3J5 372 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 MT-ND3P03897 115 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 ACTN1P12814 892 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 DYNLT1P63172 113 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 SPDYE1Q8NFV5 336 aaPredicted RBP15.75■□□□□ 0.11
PTPN9-206ENST00000618819 KIFC3Q9BVG8 833 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 NDUFB9Q9Y6M9 179 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 DLATP10515 647 aaKnown RBP15.75■□□□□ 0.11
PTPN9-206ENST00000618819 PLS3P13797 630 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 PDE6AP16499 860 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 CLCN6P51797 869 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 PRPSAP1Q14558 356 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 NCLNQ969V3 563 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 DNM2P50570 870 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 MYOCDQ8IZQ8 938 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 PARD6BQ9BYG5 372 aa15.75■□□□□ 0.11
PTPN9-206ENST00000618819 UPF3AQ9H1J1 476 aaKnown RBP15.75■□□□□ 0.11
PTPN9-206ENST00000618819 DNAJC17Q9NVM6 304 aaKnown RBP15.75■□□□□ 0.11
PTPN9-206ENST00000618819 TADA2BQ86TJ2 420 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 IQCDQ96DY2 449 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TRIM55Q9BYV6 548 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 A0A0G2JND7 137 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 RWDD2BP57060 319 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TSPY1Q01534 308 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TUBB6Q9BUF5 446 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 SOS1Q07889 1333 aaPredicted RBP15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TECP42680 631 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TRPC1P48995 793 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 KRT25Q7Z3Z0 450 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 KRT24Q2M2I5 525 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 EP400NLQ6ZTU2 488 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 TESK2Q96S53 571 aa15.74■□□□□ 0.11
PTPN9-206ENST00000618819 GIMAP4Q9NUV9 329 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms