RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CELF2-AS1Q8N7Q2 184 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 ST13P5Q8NFI4 369 aaPredicted RBP5.42□□□□□ -1.54
HERC1-215ENST00000561436 LINC01599Q8WXQ3 324 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 ZNF669Q96BR6 464 aaPredicted RBP5.42□□□□□ -1.54
HERC1-215ENST00000561436 HAUS7Q99871 368 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 PLCD4Q9BRC7 762 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 EPN3Q9H201 632 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 PIF1Q9H611 641 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 NSUN3Q9H649 340 aaKnown RBP5.42□□□□□ -1.54
HERC1-215ENST00000561436 CWC22Q9HCG8 908 aaKnown RBP5.42□□□□□ -1.54
HERC1-215ENST00000561436 GPR55Q9Y2T6 319 aaPredicted RBP5.42□□□□□ -1.54
HERC1-215ENST00000561436 MSRB2Q9Y3D2 182 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 TLDC2A0PJX2 215 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 GSTM1P09488 218 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 IFNGR1P15260 489 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 VAV1P15498 845 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 TAF7LQ5H9L4 462 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 RTP2Q5QGT7 225 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 KIAA1211LQ6NV74 962 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 GIMAP6Q6P9H5 292 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 CEP128Q6ZU80 1094 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 LINC00116Q8NCU8 138 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 PDZD8Q8NEN9 1154 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 ENOX1Q8TC92 643 aaKnown RBP5.41□□□□□ -1.54
HERC1-215ENST00000561436 MAP6Q96JE9 813 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 MCMBPQ9BTE3 642 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 GBP3Q9H0R5 595 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 ERVK13-1Q9NX77 482 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 APEX2Q9UBZ4 518 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 ZNF281Q9Y2X9 895 aa5.41□□□□□ -1.54
HERC1-215ENST00000561436 VAMP4O75379 141 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 ZNF205O95201 554 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 C8AP07357 584 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 CD3EP07766 207 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 TCEAL1Q15170 157 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 DPY19L1Q2PZI1 675 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 HEATR6Q6AI08 1181 aaKnown RBP5.4□□□□□ -1.54
HERC1-215ENST00000561436 ADAT2Q7Z6V5 191 aaKnown RBP5.4□□□□□ -1.54
HERC1-215ENST00000561436 MICAL1Q8TDZ2 1067 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 SYTL4Q96C24 671 aaPredicted RBP5.4□□□□□ -1.54
HERC1-215ENST00000561436 SHISA4Q96DD7 197 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 SLC12A9Q9BXP2 914 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 KLHL25Q9H0H3 589 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 SUSD2Q9UGT4 822 aa5.4□□□□□ -1.54
HERC1-215ENST00000561436 GRIN2AQ12879 1464 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 ANKRD34BA5PLL1 514 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 STXBP3O00186 592 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 ITGA4P13612 1032 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 BMP8BP34820 402 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 TXKP42681 527 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 SSRP1Q08945 709 aaKnown RBP5.39□□□□□ -1.55
HERC1-215ENST00000561436 MESP2Q0VG99 397 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 SDE2Q6IQ49 451 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 FAM177A1Q8N128 213 aaPredicted RBP5.39□□□□□ -1.55
HERC1-215ENST00000561436 LRRC47Q8N1G4 583 aaKnown RBP5.39□□□□□ -1.55
HERC1-215ENST00000561436 OXR1Q8N573 874 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 TMEM52Q8NDY8 209 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 APBA2Q99767 749 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 ABCC10Q5T3U5 1492 aa5.39□□□□□ -1.55
HERC1-215ENST00000561436 CUX1P39880 1505 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 FITM1A5D6W6 292 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 FAM221BA6H8Z2 402 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 SUSD5O60279 629 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 GSNP06396 782 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 NCLP19338 710 aaKnown RBP5.38□□□□□ -1.55
HERC1-215ENST00000561436 DUSP4Q13115 394 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 SLC14A2Q15849 920 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 CWF19L1Q69YN2 538 aaKnown RBP5.38□□□□□ -1.55
HERC1-215ENST00000561436 ZNF605Q86T29 641 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 CRACR2BQ8N4Y2 399 aaPredicted RBP5.38□□□□□ -1.55
HERC1-215ENST00000561436 POU5F2Q8N7G0 328 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 ANKS4BQ8N8V4 417 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 PPP1R14AQ96A00 147 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 CCDC120Q96HB5 630 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 FCRL3Q96P31 734 aaPredicted RBP5.38□□□□□ -1.55
HERC1-215ENST00000561436 IPO9Q96P70 1041 aaKnown RBP5.38□□□□□ -1.55
HERC1-215ENST00000561436 GOLGA2P5Q9HBQ8 144 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 LRP2BPQ9P2M1 347 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 TBX22Q9Y458 520 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 FHOD1Q9Y613 1164 aa5.38□□□□□ -1.55
HERC1-215ENST00000561436 FADS2P1A8MWK0 482 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 PPM1BO75688 479 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 MSL3P1P0C860 447 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 PDE6BP35913 854 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 RTP1P59025 263 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 SV2CQ496J9 727 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 HSF5Q4G112 596 aaPredicted RBP5.37□□□□□ -1.55
HERC1-215ENST00000561436 ANKRD39Q53RE8 183 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 ADGRF1Q5T601 910 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 NLRX1Q86UT6 975 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 NAT16Q8N8M0 369 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 THAP3Q8WTV1 239 aaPredicted RBP5.37□□□□□ -1.55
HERC1-215ENST00000561436 INTS4Q96HW7 963 aaKnown RBP5.37□□□□□ -1.55
HERC1-215ENST00000561436 FCRL2Q96LA5 508 aaPredicted RBP5.37□□□□□ -1.55
HERC1-215ENST00000561436 JMJD8Q96S16 334 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 DNAJC7Q99615 494 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 SLKQ9H2G2 1235 aaPredicted RBP5.37□□□□□ -1.55
HERC1-215ENST00000561436 DCP1AQ9NPI6 582 aaPredicted RBP5.37□□□□□ -1.55
HERC1-215ENST00000561436 SUGT1Q9Y2Z0 365 aa5.37□□□□□ -1.55
HERC1-215ENST00000561436 PRG4Q92954 1404 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 285 ms